Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC71Q8IV32 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 MFSD11-216ENST00000590393 1141 ntBASIC19.15■□□□□ 0.66
CCDC71Q8IV32 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 AC009237.3-201ENST00000393279 1427 ntBASIC19.15■□□□□ 0.66
CCDC71Q8IV32 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 KRT87P-202ENST00000534226 1464 ntBASIC19.15■□□□□ 0.66
CCDC71Q8IV32 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC71Q8IV32 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC71Q8IV32 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC71Q8IV32 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.14■□□□□ 0.66
CCDC71Q8IV32 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.14■□□□□ 0.66
CCDC71Q8IV32 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC71Q8IV32 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC71Q8IV32 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC71Q8IV32 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC71Q8IV32 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC71Q8IV32 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC71Q8IV32 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC71Q8IV32 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC71Q8IV32 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC71Q8IV32 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC71Q8IV32 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC71Q8IV32 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC71Q8IV32 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 GPX1P1-201ENST00000388829 606 ntBASIC19.13■□□□□ 0.65
CCDC71Q8IV32 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CCDC71Q8IV32 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC71Q8IV32 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 AC112907.3-201ENST00000577781 2400 ntBASIC19.11■□□□□ 0.65
CCDC71Q8IV32 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC71Q8IV32 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms