Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 AC061975.6-201ENST00000579045 1553 ntBASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 AC105265.2-201ENST00000467189 838 ntBASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 AC005837.3-201ENST00000612163 286 ntBASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
MRPL55Q7Z7F7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
MRPL55Q7Z7F7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 AC027612.3-201ENST00000413684 1047 ntBASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 AC011484.1-201ENST00000377652 1995 ntBASIC13.11□□□□□ -0.31
MRPL55Q7Z7F7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 GABARAPL3-202ENST00000624044 1851 ntBASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 AC073130.3-201ENST00000624389 2278 ntBASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 LINC02228-203ENST00000641970 1355 ntBASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 AC245052.3-201ENST00000450182 901 ntBASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.1□□□□□ -0.31
MRPL55Q7Z7F7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms