Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC30.82■■■□□ 2.53
CCDC141Q6ZP82 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC30.82■■■□□ 2.53
CCDC141Q6ZP82 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
CCDC141Q6ZP82 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC30.82■■■□□ 2.52
CCDC141Q6ZP82 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CCDC141Q6ZP82 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC30.82■■■□□ 2.52
CCDC141Q6ZP82 TK2-204ENST00000525974 1178 ntTSL 2 BASIC30.82■■■□□ 2.52
CCDC141Q6ZP82 RARRES2P10-201ENST00000564312 460 ntBASIC30.82■■■□□ 2.52
CCDC141Q6ZP82 LINC01023-201ENST00000606054 436 ntBASIC30.82■■■□□ 2.52
CCDC141Q6ZP82 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC30.82■■■□□ 2.52
CCDC141Q6ZP82 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
CCDC141Q6ZP82 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 HES2-206ENST00000489730 730 ntTSL 2 BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 AL135905.2-201ENST00000584934 1404 ntBASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
CCDC141Q6ZP82 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
CCDC141Q6ZP82 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC30.79■■■□□ 2.52
CCDC141Q6ZP82 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
CCDC141Q6ZP82 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC30.79■■■□□ 2.52
CCDC141Q6ZP82 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC30.79■■■□□ 2.52
CCDC141Q6ZP82 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CCDC141Q6ZP82 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
CCDC141Q6ZP82 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 MIR4785-201ENST00000585005 73 ntBASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC30.78■■■□□ 2.52
CCDC141Q6ZP82 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC141Q6ZP82 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC141Q6ZP82 AC211429.1-201ENST00000415277 523 ntBASIC30.77■■■□□ 2.52
CCDC141Q6ZP82 FAM210CP-201ENST00000445714 574 ntBASIC30.77■■■□□ 2.52
CCDC141Q6ZP82 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC30.77■■■□□ 2.52
CCDC141Q6ZP82 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC141Q6ZP82 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC30.77■■■□□ 2.52
CCDC141Q6ZP82 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
CCDC141Q6ZP82 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC141Q6ZP82 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC141Q6ZP82 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC141Q6ZP82 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
CCDC141Q6ZP82 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC30.76■■■□□ 2.52
CCDC141Q6ZP82 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC30.76■■■□□ 2.52
CCDC141Q6ZP82 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CCDC141Q6ZP82 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.52
CCDC141Q6ZP82 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC30.76■■■□□ 2.52
CCDC141Q6ZP82 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.52
CCDC141Q6ZP82 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC30.76■■■□□ 2.52
CCDC141Q6ZP82 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC30.76■■■□□ 2.52
CCDC141Q6ZP82 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
CCDC141Q6ZP82 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC30.76■■■□□ 2.52
CCDC141Q6ZP82 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CCDC141Q6ZP82 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
CCDC141Q6ZP82 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC30.76■■■□□ 2.51
CCDC141Q6ZP82 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CCDC141Q6ZP82 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CCDC141Q6ZP82 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC30.76■■■□□ 2.51
CCDC141Q6ZP82 AL390719.1-204ENST00000412397 1219 ntBASIC30.76■■■□□ 2.51
CCDC141Q6ZP82 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC30.76■■■□□ 2.51
CCDC141Q6ZP82 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CCDC141Q6ZP82 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC30.75■■■□□ 2.51
CCDC141Q6ZP82 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms