Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GDPD4Q6W3E5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.58■□□□□ 0.88
GDPD4Q6W3E5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
GDPD4Q6W3E5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
GDPD4Q6W3E5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.58■□□□□ 0.88
GDPD4Q6W3E5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
GDPD4Q6W3E5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 PLK5-205ENST00000642079 1969 ntBASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GDPD4Q6W3E5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 RNA5SP413-201ENST00000516373 109 ntBASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 MIR2861-201ENST00000636310 90 ntBASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.56■□□□□ 0.88
GDPD4Q6W3E5 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 PKD1P6-201ENST00000343738 4769 ntBASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 AC005229.4-201ENST00000610085 2198 ntBASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
GDPD4Q6W3E5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
GDPD4Q6W3E5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 C2orf69P4-201ENST00000565394 541 ntBASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.53■□□□□ 0.88
GDPD4Q6W3E5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDPD4Q6W3E5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDPD4Q6W3E5 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDPD4Q6W3E5 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDPD4Q6W3E5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GDPD4Q6W3E5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms