Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXR1Q6PIV2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 OXCT2P1-201ENST00000447263 1535 ntBASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
FOXR1Q6PIV2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 OR2I1P-207ENST00000453522 948 ntBASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 TERF1P2-201ENST00000583350 1212 ntBASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
FOXR1Q6PIV2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXR1Q6PIV2 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXR1Q6PIV2 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
FOXR1Q6PIV2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXR1Q6PIV2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXR1Q6PIV2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.22■□□□□ 0.99
FOXR1Q6PIV2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
FOXR1Q6PIV2 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXR1Q6PIV2 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.22■□□□□ 0.99
FOXR1Q6PIV2 AC027702.1-201ENST00000563810 1770 ntBASIC21.22■□□□□ 0.99
FOXR1Q6PIV2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
FOXR1Q6PIV2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
FOXR1Q6PIV2 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXR1Q6PIV2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.2■□□□□ 0.99
FOXR1Q6PIV2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FOXR1Q6PIV2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms