Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 TK2-213ENST00000563369 882 ntTSL 5 BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CNKSR3Q6P9H4 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 RCN1P1-201ENST00000400413 996 ntBASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CNKSR3Q6P9H4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CNKSR3Q6P9H4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 AC026471.5-201ENST00000615068 467 ntBASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.16■■□□□ 1.14
CNKSR3Q6P9H4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CNKSR3Q6P9H4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
CNKSR3Q6P9H4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CNKSR3Q6P9H4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.14■■□□□ 1.13
CNKSR3Q6P9H4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CNKSR3Q6P9H4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CNKSR3Q6P9H4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.14■■□□□ 1.13
CNKSR3Q6P9H4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CNKSR3Q6P9H4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CNKSR3Q6P9H4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CNKSR3Q6P9H4 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CNKSR3Q6P9H4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CNKSR3Q6P9H4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms