Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
PTCRAQ6ISU1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCRAQ6ISU1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCRAQ6ISU1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCRAQ6ISU1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTCRAQ6ISU1 TPM4P1-201ENST00000436100 807 ntBASIC21.28■■□□□ 1
PTCRAQ6ISU1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.28■■□□□ 1
PTCRAQ6ISU1 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.28■■□□□ 1
PTCRAQ6ISU1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTCRAQ6ISU1 WWOX-216ENST00000569818 525 ntBASIC21.28■■□□□ 1
PTCRAQ6ISU1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.28■■□□□ 1
PTCRAQ6ISU1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
PTCRAQ6ISU1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCRAQ6ISU1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.28■■□□□ 1
PTCRAQ6ISU1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.28■■□□□ 1
PTCRAQ6ISU1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.28■■□□□ 1
PTCRAQ6ISU1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.28■■□□□ 1
PTCRAQ6ISU1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTCRAQ6ISU1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTCRAQ6ISU1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTCRAQ6ISU1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.27■■□□□ 1
PTCRAQ6ISU1 AL390955.1-201ENST00000428694 934 ntBASIC21.27■■□□□ 1
PTCRAQ6ISU1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PTCRAQ6ISU1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.27■■□□□ 1
PTCRAQ6ISU1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.27■■□□□ 1
PTCRAQ6ISU1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.27■■□□□ 1
PTCRAQ6ISU1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.27■■□□□ 1
PTCRAQ6ISU1 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.27■■□□□ 1
PTCRAQ6ISU1 AC010947.1-201ENST00000623454 693 ntBASIC21.27■■□□□ 1
PTCRAQ6ISU1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTCRAQ6ISU1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTCRAQ6ISU1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.27■■□□□ 1
PTCRAQ6ISU1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
PTCRAQ6ISU1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.27■□□□□ 0.99
PTCRAQ6ISU1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.27■□□□□ 0.99
PTCRAQ6ISU1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 NBPF21P-201ENST00000425093 1451 ntBASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 PGM5P4-201ENST00000421970 445 ntBASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 UPK3BP1-201ENST00000428678 509 ntBASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 AL121829.2-201ENST00000620908 328 ntBASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTCRAQ6ISU1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 AL121894.2-201ENST00000602977 491 ntBASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTCRAQ6ISU1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 FITM1-202ENST00000559294 800 ntBASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.24■□□□□ 0.99
PTCRAQ6ISU1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 AP002982.1-201ENST00000492365 877 ntBASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.23■□□□□ 0.99
PTCRAQ6ISU1 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms