Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
KRT40Q6A162 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.7■■□□□ 1.38
KRT40Q6A162 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
KRT40Q6A162 TERF1P5-201ENST00000477545 1207 ntBASIC23.7■■□□□ 1.38
KRT40Q6A162 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.7■■□□□ 1.38
KRT40Q6A162 AC142086.2-201ENST00000569753 217 ntBASIC23.7■■□□□ 1.38
KRT40Q6A162 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
KRT40Q6A162 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
KRT40Q6A162 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
KRT40Q6A162 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
KRT40Q6A162 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
KRT40Q6A162 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
KRT40Q6A162 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 GABARAPL3-202ENST00000624044 1851 ntBASIC23.69■■□□□ 1.38
KRT40Q6A162 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
KRT40Q6A162 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 KRT18P11-201ENST00000435214 1283 ntBASIC23.69■■□□□ 1.38
KRT40Q6A162 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.69■■□□□ 1.38
KRT40Q6A162 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
KRT40Q6A162 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.69■■□□□ 1.38
KRT40Q6A162 MFSD11-216ENST00000590393 1141 ntBASIC23.69■■□□□ 1.38
KRT40Q6A162 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
KRT40Q6A162 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
KRT40Q6A162 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.69■■□□□ 1.38
KRT40Q6A162 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
KRT40Q6A162 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
KRT40Q6A162 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.68■■□□□ 1.38
KRT40Q6A162 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
KRT40Q6A162 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
KRT40Q6A162 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
KRT40Q6A162 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
KRT40Q6A162 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
KRT40Q6A162 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KRT40Q6A162 KRT18P6-201ENST00000555540 1265 ntBASIC23.68■■□□□ 1.38
KRT40Q6A162 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
KRT40Q6A162 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.68■■□□□ 1.38
KRT40Q6A162 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.68■■□□□ 1.38
KRT40Q6A162 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.68■■□□□ 1.38
KRT40Q6A162 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
KRT40Q6A162 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KRT40Q6A162 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
KRT40Q6A162 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
KRT40Q6A162 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KRT40Q6A162 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.67■■□□□ 1.38
KRT40Q6A162 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KRT40Q6A162 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KRT40Q6A162 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
KRT40Q6A162 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
KRT40Q6A162 AC007322.3-201ENST00000426526 701 ntBASIC23.67■■□□□ 1.38
KRT40Q6A162 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.67■■□□□ 1.38
KRT40Q6A162 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
KRT40Q6A162 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.67■■□□□ 1.38
KRT40Q6A162 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KRT40Q6A162 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KRT40Q6A162 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KRT40Q6A162 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC23.67■■□□□ 1.38
KRT40Q6A162 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.67■■□□□ 1.38
KRT40Q6A162 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRT40Q6A162 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.66■■□□□ 1.38
KRT40Q6A162 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
KRT40Q6A162 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRT40Q6A162 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
KRT40Q6A162 METTL26-203ENST00000397664 604 ntTSL 2 BASIC23.66■■□□□ 1.38
KRT40Q6A162 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRT40Q6A162 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRT40Q6A162 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.66■■□□□ 1.38
KRT40Q6A162 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRT40Q6A162 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
KRT40Q6A162 AL050303.2-201ENST00000619798 666 ntBASIC23.66■■□□□ 1.38
KRT40Q6A162 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.66■■□□□ 1.38
KRT40Q6A162 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
KRT40Q6A162 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.66■■□□□ 1.38
KRT40Q6A162 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
KRT40Q6A162 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KRT40Q6A162 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KRT40Q6A162 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.66■■□□□ 1.38
KRT40Q6A162 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KRT40Q6A162 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KRT40Q6A162 AC073130.3-201ENST00000624389 2278 ntBASIC23.65■■□□□ 1.38
KRT40Q6A162 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KRT40Q6A162 AC093827.2-201ENST00000512654 315 ntBASIC23.65■■□□□ 1.38
KRT40Q6A162 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.65■■□□□ 1.38
KRT40Q6A162 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.65■■□□□ 1.38
KRT40Q6A162 MIR2861-201ENST00000636310 90 ntBASIC23.65■■□□□ 1.38
KRT40Q6A162 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
KRT40Q6A162 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.65■■□□□ 1.38
KRT40Q6A162 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms