Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 AC027682.1-201ENST00000562846 899 ntBASIC19.63■□□□□ 0.73
RNF220Q5VTB9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF220Q5VTB9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 AP006587.3-201ENST00000525742 1516 ntBASIC19.62■□□□□ 0.73
RNF220Q5VTB9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF220Q5VTB9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 EDA-201ENST00000338901 1233 ntBASIC19.61■□□□□ 0.73
RNF220Q5VTB9 PBX2P1-201ENST00000493219 1291 ntBASIC19.61■□□□□ 0.73
RNF220Q5VTB9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 AC005332.8-201ENST00000622750 2735 ntBASIC19.61■□□□□ 0.73
RNF220Q5VTB9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.61■□□□□ 0.73
RNF220Q5VTB9 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 LTB4R2-202ENST00000528054 3092 ntBASIC19.6■□□□□ 0.73
RNF220Q5VTB9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 AC003102.1-202ENST00000563394 1796 ntBASIC19.6■□□□□ 0.73
RNF220Q5VTB9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 AC099791.1-201ENST00000416440 715 ntBASIC19.6■□□□□ 0.73
RNF220Q5VTB9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 AC008764.7-201ENST00000593779 1081 ntBASIC19.6■□□□□ 0.73
RNF220Q5VTB9 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.6■□□□□ 0.73
RNF220Q5VTB9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
RNF220Q5VTB9 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 AP001330.3-201ENST00000520123 633 ntBASIC19.59■□□□□ 0.73
RNF220Q5VTB9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.59■□□□□ 0.73
RNF220Q5VTB9 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
RNF220Q5VTB9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF220Q5VTB9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RNF220Q5VTB9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RNF220Q5VTB9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RNF220Q5VTB9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms