Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.35■□□□□ 0.85
LDLRAP1Q5SW96 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 GPX1P1-201ENST00000388829 606 ntBASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 AC083906.2-201ENST00000511578 360 ntBASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
LDLRAP1Q5SW96 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.33■□□□□ 0.85
LDLRAP1Q5SW96 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LDLRAP1Q5SW96 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LDLRAP1Q5SW96 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.33■□□□□ 0.84
LDLRAP1Q5SW96 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LDLRAP1Q5SW96 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LDLRAP1Q5SW96 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.32■□□□□ 0.84
LDLRAP1Q5SW96 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 AC092667.1-201ENST00000434301 2586 ntBASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 MCRIP2P1-201ENST00000394346 511 ntBASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 AC093787.1-201ENST00000450396 207 ntBASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 PLK5-205ENST00000642079 1969 ntBASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LDLRAP1Q5SW96 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 AC010980.2-201ENST00000587099 1412 ntBASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 PGM5P4-201ENST00000421970 445 ntBASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LDLRAP1Q5SW96 MKRN4P-201ENST00000444706 1521 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms