Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 AC099791.1-201ENST00000416440 715 ntBASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.21■□□□□ 0.83
SH2D4BQ5SQS7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 AL139246.5-201ENST00000606645 996 ntBASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.2■□□□□ 0.82
SH2D4BQ5SQS7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 AFG3L1P-217ENST00000557444 2447 ntBASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SH2D4BQ5SQS7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4BQ5SQS7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 AC027682.1-201ENST00000562846 899 ntBASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4BQ5SQS7 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4BQ5SQS7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4BQ5SQS7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.16■□□□□ 0.82
SH2D4BQ5SQS7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms