Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRK2Q5S007 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.97■□□□□ 0.47
LRRK2Q5S007 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRK2Q5S007 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRK2Q5S007 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRK2Q5S007 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRK2Q5S007 AC007322.3-201ENST00000426526 701 ntBASIC17.97■□□□□ 0.47
LRRK2Q5S007 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRK2Q5S007 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRK2Q5S007 AC026271.3-201ENST00000571884 352 ntBASIC17.97■□□□□ 0.47
LRRK2Q5S007 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRK2Q5S007 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LRRK2Q5S007 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRK2Q5S007 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRK2Q5S007 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRRK2Q5S007 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRK2Q5S007 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRRK2Q5S007 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.97■□□□□ 0.47
LRRK2Q5S007 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.97■□□□□ 0.47
LRRK2Q5S007 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRK2Q5S007 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRK2Q5S007 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRK2Q5S007 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRK2Q5S007 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LRRK2Q5S007 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRK2Q5S007 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRK2Q5S007 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRK2Q5S007 AC116562.2-201ENST00000507042 360 ntBASIC17.96■□□□□ 0.47
LRRK2Q5S007 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRRK2Q5S007 HTR7P1-201ENST00000538670 1336 ntBASIC17.96■□□□□ 0.47
LRRK2Q5S007 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRK2Q5S007 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.96■□□□□ 0.47
LRRK2Q5S007 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRK2Q5S007 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
LRRK2Q5S007 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.96■□□□□ 0.47
LRRK2Q5S007 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRK2Q5S007 LINC01238-205ENST00000567549 1107 ntBASIC17.96■□□□□ 0.47
LRRK2Q5S007 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.96■□□□□ 0.47
LRRK2Q5S007 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.96■□□□□ 0.47
LRRK2Q5S007 FAM87A-204ENST00000613235 858 ntBASIC17.96■□□□□ 0.47
LRRK2Q5S007 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRK2Q5S007 AC124283.5-201ENST00000624661 1809 ntBASIC17.95■□□□□ 0.46
LRRK2Q5S007 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRK2Q5S007 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRK2Q5S007 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRK2Q5S007 KRT16P5-201ENST00000455284 522 ntBASIC17.95■□□□□ 0.46
LRRK2Q5S007 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LRRK2Q5S007 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.95■□□□□ 0.46
LRRK2Q5S007 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LRRK2Q5S007 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRK2Q5S007 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LRRK2Q5S007 ATP5G1P1-201ENST00000448724 379 ntBASIC17.95■□□□□ 0.46
LRRK2Q5S007 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.95■□□□□ 0.46
LRRK2Q5S007 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
LRRK2Q5S007 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.95■□□□□ 0.46
LRRK2Q5S007 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.95■□□□□ 0.46
LRRK2Q5S007 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRK2Q5S007 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.94■□□□□ 0.46
LRRK2Q5S007 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRK2Q5S007 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRK2Q5S007 FAM207BP-201ENST00000447172 505 ntBASIC17.94■□□□□ 0.46
LRRK2Q5S007 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.94■□□□□ 0.46
LRRK2Q5S007 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRK2Q5S007 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRK2Q5S007 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRK2Q5S007 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRK2Q5S007 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LRRK2Q5S007 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRK2Q5S007 AC092068.2-201ENST00000590491 1708 ntBASIC17.94■□□□□ 0.46
LRRK2Q5S007 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LRRK2Q5S007 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LRRK2Q5S007 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRK2Q5S007 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LRRK2Q5S007 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.94■□□□□ 0.46
LRRK2Q5S007 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.94■□□□□ 0.46
LRRK2Q5S007 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.93■□□□□ 0.46
LRRK2Q5S007 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRK2Q5S007 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LRRK2Q5S007 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRK2Q5S007 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.93■□□□□ 0.46
LRRK2Q5S007 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.93■□□□□ 0.46
LRRK2Q5S007 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.93■□□□□ 0.46
LRRK2Q5S007 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.93■□□□□ 0.46
LRRK2Q5S007 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRK2Q5S007 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LRRK2Q5S007 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LRRK2Q5S007 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.92■□□□□ 0.46
LRRK2Q5S007 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRK2Q5S007 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
LRRK2Q5S007 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRK2Q5S007 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.92■□□□□ 0.46
LRRK2Q5S007 NAPSB-206ENST00000562112 1266 ntBASIC17.92■□□□□ 0.46
LRRK2Q5S007 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRK2Q5S007 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.92■□□□□ 0.46
LRRK2Q5S007 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
LRRK2Q5S007 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LRRK2Q5S007 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC17.91■□□□□ 0.46
LRRK2Q5S007 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRK2Q5S007 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.91■□□□□ 0.46
LRRK2Q5S007 AP002982.1-201ENST00000492365 877 ntBASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms