Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDS5AQ29RF7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
PDS5AQ29RF7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDS5AQ29RF7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PDS5AQ29RF7 KRT8P36-201ENST00000489121 1440 ntBASIC24.68■■□□□ 1.54
PDS5AQ29RF7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PDS5AQ29RF7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 AC005829.2-201ENST00000571422 1056 ntBASIC24.66■■□□□ 1.54
PDS5AQ29RF7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 FEM1AP4-201ENST00000443167 1987 ntBASIC24.66■■□□□ 1.54
PDS5AQ29RF7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PDS5AQ29RF7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 RPS2P52-201ENST00000469610 820 ntBASIC24.65■■□□□ 1.54
PDS5AQ29RF7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PDS5AQ29RF7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDS5AQ29RF7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDS5AQ29RF7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDS5AQ29RF7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC24.64■■□□□ 1.54
PDS5AQ29RF7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
PDS5AQ29RF7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.64■■□□□ 1.54
PDS5AQ29RF7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
PDS5AQ29RF7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDS5AQ29RF7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
PDS5AQ29RF7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC24.64■■□□□ 1.54
PDS5AQ29RF7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
PDS5AQ29RF7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
PDS5AQ29RF7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
PDS5AQ29RF7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
PDS5AQ29RF7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
PDS5AQ29RF7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 AC121338.2-201ENST00000622535 1744 ntBASIC24.63■■□□□ 1.53
PDS5AQ29RF7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC24.63■■□□□ 1.53
PDS5AQ29RF7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC24.62■■□□□ 1.53
PDS5AQ29RF7 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC24.62■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms