Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 AC019069.1-201ENST00000610008 1333 ntBASIC19.04■□□□□ 0.64
SYPL1Q16563 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SYPL1Q16563 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SYPL1Q16563 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYPL1Q16563 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYPL1Q16563 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYPL1Q16563 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.04■□□□□ 0.64
SYPL1Q16563 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.04■□□□□ 0.64
SYPL1Q16563 KRT19P1-201ENST00000405746 1186 ntBASIC19.04■□□□□ 0.64
SYPL1Q16563 SLC7A5P1-201ENST00000568957 537 ntBASIC19.04■□□□□ 0.64
SYPL1Q16563 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYPL1Q16563 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
SYPL1Q16563 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.04■□□□□ 0.64
SYPL1Q16563 AC092720.2-201ENST00000602388 1665 ntBASIC19.04■□□□□ 0.64
SYPL1Q16563 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SYPL1Q16563 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SYPL1Q16563 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.03■□□□□ 0.64
SYPL1Q16563 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.03■□□□□ 0.64
SYPL1Q16563 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.03■□□□□ 0.64
SYPL1Q16563 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.03■□□□□ 0.64
SYPL1Q16563 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 AC243732.1-201ENST00000612648 864 ntBASIC19.03■□□□□ 0.64
SYPL1Q16563 MIR2861-201ENST00000636310 90 ntBASIC19.03■□□□□ 0.64
SYPL1Q16563 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SYPL1Q16563 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.03■□□□□ 0.64
SYPL1Q16563 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SYPL1Q16563 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
SYPL1Q16563 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SYPL1Q16563 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SYPL1Q16563 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.03■□□□□ 0.64
SYPL1Q16563 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.03■□□□□ 0.64
SYPL1Q16563 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYPL1Q16563 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SYPL1Q16563 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYPL1Q16563 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYPL1Q16563 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYPL1Q16563 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.02■□□□□ 0.64
SYPL1Q16563 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYPL1Q16563 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYPL1Q16563 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.02■□□□□ 0.64
SYPL1Q16563 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.02■□□□□ 0.64
SYPL1Q16563 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYPL1Q16563 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.02■□□□□ 0.64
SYPL1Q16563 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.02■□□□□ 0.64
SYPL1Q16563 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYPL1Q16563 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.02■□□□□ 0.64
SYPL1Q16563 UBE2DNL-204ENST00000602536 740 ntBASIC19.02■□□□□ 0.64
SYPL1Q16563 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.02■□□□□ 0.64
SYPL1Q16563 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
SYPL1Q16563 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SYPL1Q16563 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SYPL1Q16563 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SYPL1Q16563 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SYPL1Q16563 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SYPL1Q16563 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SYPL1Q16563 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SYPL1Q16563 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.02■□□□□ 0.63
SYPL1Q16563 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
SYPL1Q16563 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.02■□□□□ 0.63
SYPL1Q16563 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYPL1Q16563 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SYPL1Q16563 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SYPL1Q16563 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.01■□□□□ 0.63
SYPL1Q16563 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYPL1Q16563 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SYPL1Q16563 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SYPL1Q16563 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SYPL1Q16563 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.01■□□□□ 0.63
SYPL1Q16563 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.01■□□□□ 0.63
SYPL1Q16563 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.01■□□□□ 0.63
SYPL1Q16563 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.01■□□□□ 0.63
SYPL1Q16563 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.01■□□□□ 0.63
SYPL1Q16563 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.01■□□□□ 0.63
SYPL1Q16563 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.01■□□□□ 0.63
SYPL1Q16563 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SYPL1Q16563 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
SYPL1Q16563 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SYPL1Q16563 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
SYPL1Q16563 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.01■□□□□ 0.63
SYPL1Q16563 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
SYPL1Q16563 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19■□□□□ 0.63
SYPL1Q16563 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19■□□□□ 0.63
SYPL1Q16563 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SYPL1Q16563 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms