Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 RARRES2P6-201ENST00000567333 442 ntBASIC19.71■□□□□ 0.75
HMGCS1Q01581 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 KRT18P61-201ENST00000585825 1298 ntBASIC19.71■□□□□ 0.75
HMGCS1Q01581 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.71■□□□□ 0.75
HMGCS1Q01581 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HMGCS1Q01581 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HMGCS1Q01581 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HMGCS1Q01581 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGCS1Q01581 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
HMGCS1Q01581 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HMGCS1Q01581 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
HMGCS1Q01581 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 AC026271.2-201ENST00000428091 497 ntBASIC19.7■□□□□ 0.74
HMGCS1Q01581 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGCS1Q01581 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.7■□□□□ 0.74
HMGCS1Q01581 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGCS1Q01581 MIR6821-201ENST00000617625 74 ntBASIC19.7■□□□□ 0.74
HMGCS1Q01581 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.7■□□□□ 0.74
HMGCS1Q01581 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.7■□□□□ 0.74
HMGCS1Q01581 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.7■□□□□ 0.74
HMGCS1Q01581 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.7■□□□□ 0.74
HMGCS1Q01581 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.7■□□□□ 0.74
HMGCS1Q01581 AL162377.1-201ENST00000618844 1793 ntBASIC19.7■□□□□ 0.74
HMGCS1Q01581 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HMGCS1Q01581 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.69■□□□□ 0.74
HMGCS1Q01581 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCS1Q01581 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.69■□□□□ 0.74
HMGCS1Q01581 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
HMGCS1Q01581 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCS1Q01581 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCS1Q01581 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCS1Q01581 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCS1Q01581 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCS1Q01581 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.69■□□□□ 0.74
HMGCS1Q01581 KRT18P20-201ENST00000548986 1279 ntBASIC19.69■□□□□ 0.74
HMGCS1Q01581 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCS1Q01581 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HMGCS1Q01581 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.69■□□□□ 0.74
HMGCS1Q01581 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
HMGCS1Q01581 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HMGCS1Q01581 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
HMGCS1Q01581 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
HMGCS1Q01581 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.69■□□□□ 0.74
HMGCS1Q01581 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS1Q01581 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGCS1Q01581 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGCS1Q01581 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HMGCS1Q01581 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.68■□□□□ 0.74
HMGCS1Q01581 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS1Q01581 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS1Q01581 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.68■□□□□ 0.74
HMGCS1Q01581 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS1Q01581 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
HMGCS1Q01581 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS1Q01581 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.68■□□□□ 0.74
HMGCS1Q01581 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.68■□□□□ 0.74
HMGCS1Q01581 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS1Q01581 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS1Q01581 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HMGCS1Q01581 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.68■□□□□ 0.74
HMGCS1Q01581 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HMGCS1Q01581 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
HMGCS1Q01581 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
HMGCS1Q01581 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
HMGCS1Q01581 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS1Q01581 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
HMGCS1Q01581 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS1Q01581 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.67■□□□□ 0.74
HMGCS1Q01581 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.67■□□□□ 0.74
HMGCS1Q01581 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HMGCS1Q01581 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.67■□□□□ 0.74
HMGCS1Q01581 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.67■□□□□ 0.74
HMGCS1Q01581 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
HMGCS1Q01581 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HMGCS1Q01581 AC092720.2-201ENST00000602388 1665 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms