Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.63■□□□□ 0.57
SIRPAP78324 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIRPAP78324 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SIRPAP78324 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SIRPAP78324 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SIRPAP78324 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
SIRPAP78324 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPAP78324 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPAP78324 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.62■□□□□ 0.57
SIRPAP78324 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPAP78324 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.62■□□□□ 0.57
SIRPAP78324 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.62■□□□□ 0.57
SIRPAP78324 AC083906.2-201ENST00000511578 360 ntBASIC18.62■□□□□ 0.57
SIRPAP78324 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.62■□□□□ 0.57
SIRPAP78324 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.62■□□□□ 0.57
SIRPAP78324 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.62■□□□□ 0.57
SIRPAP78324 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPAP78324 KRT16P2-201ENST00000414673 1423 ntBASIC18.62■□□□□ 0.57
SIRPAP78324 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPAP78324 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPAP78324 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.62■□□□□ 0.57
SIRPAP78324 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPAP78324 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SIRPAP78324 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.62■□□□□ 0.57
SIRPAP78324 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SIRPAP78324 AC092667.1-201ENST00000434301 2586 ntBASIC18.61■□□□□ 0.57
SIRPAP78324 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPAP78324 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPAP78324 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPAP78324 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPAP78324 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.61■□□□□ 0.57
SIRPAP78324 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPAP78324 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SIRPAP78324 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.61■□□□□ 0.57
SIRPAP78324 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
SIRPAP78324 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.61■□□□□ 0.57
SIRPAP78324 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SIRPAP78324 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.61■□□□□ 0.57
SIRPAP78324 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPAP78324 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPAP78324 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.61■□□□□ 0.57
SIRPAP78324 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPAP78324 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SIRPAP78324 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPAP78324 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPAP78324 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SIRPAP78324 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.6■□□□□ 0.57
SIRPAP78324 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPAP78324 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPAP78324 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPAP78324 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.6■□□□□ 0.57
SIRPAP78324 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SIRPAP78324 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPAP78324 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPAP78324 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPAP78324 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.6■□□□□ 0.57
SIRPAP78324 CYP2T1P-201ENST00000432607 1285 ntBASIC18.6■□□□□ 0.57
SIRPAP78324 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.6■□□□□ 0.57
SIRPAP78324 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.6■□□□□ 0.57
SIRPAP78324 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPAP78324 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.6■□□□□ 0.57
SIRPAP78324 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPAP78324 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIRPAP78324 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.6■□□□□ 0.57
SIRPAP78324 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPAP78324 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPAP78324 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.59■□□□□ 0.57
SIRPAP78324 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SIRPAP78324 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPAP78324 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.59■□□□□ 0.57
SIRPAP78324 SLC29A4P1-201ENST00000398760 971 ntBASIC18.59■□□□□ 0.57
SIRPAP78324 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.59■□□□□ 0.57
SIRPAP78324 AC105036.2-201ENST00000569468 176 ntBASIC18.59■□□□□ 0.57
SIRPAP78324 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SIRPAP78324 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPAP78324 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPAP78324 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.59■□□□□ 0.57
SIRPAP78324 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SIRPAP78324 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SIRPAP78324 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIRPAP78324 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIRPAP78324 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SIRPAP78324 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.57
SIRPAP78324 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIRPAP78324 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.58■□□□□ 0.57
SIRPAP78324 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.58■□□□□ 0.57
SIRPAP78324 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.58■□□□□ 0.57
SIRPAP78324 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.58■□□□□ 0.57
SIRPAP78324 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIRPAP78324 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIRPAP78324 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPAP78324 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.58■□□□□ 0.56
SIRPAP78324 AF201337.1-201ENST00000520239 748 ntBASIC18.58■□□□□ 0.56
SIRPAP78324 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SIRPAP78324 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SIRPAP78324 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SIRPAP78324 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPAP78324 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SIRPAP78324 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIRPAP78324 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms