Protein–RNA interactions for Protein: P61353

RPL27, 60S ribosomal protein L27, humanhuman

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27P61353 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RPL27P61353 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RPL27P61353 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPL27P61353 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPL27P61353 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.29■□□□□ 0.52
RPL27P61353 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPL27P61353 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RPL27P61353 AC092720.2-201ENST00000602388 1665 ntBASIC18.29■□□□□ 0.52
RPL27P61353 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPL27P61353 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPL27P61353 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPL27P61353 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.29■□□□□ 0.52
RPL27P61353 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.29■□□□□ 0.52
RPL27P61353 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RPL27P61353 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RPL27P61353 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPL27P61353 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPL27P61353 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RPL27P61353 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPL27P61353 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.29■□□□□ 0.52
RPL27P61353 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.29■□□□□ 0.52
RPL27P61353 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
RPL27P61353 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
RPL27P61353 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RPL27P61353 SLC25A24-204ENST00000569674 2357 ntBASIC18.28■□□□□ 0.52
RPL27P61353 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPL27P61353 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RPL27P61353 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RPL27P61353 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RPL27P61353 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPL27P61353 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPL27P61353 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPL27P61353 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.28■□□□□ 0.52
RPL27P61353 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.28■□□□□ 0.52
RPL27P61353 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RPL27P61353 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPL27P61353 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPL27P61353 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPL27P61353 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RPL27P61353 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPL27P61353 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.28■□□□□ 0.52
RPL27P61353 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPL27P61353 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RPL27P61353 AC087623.3-201ENST00000607047 1098 ntBASIC18.28■□□□□ 0.52
RPL27P61353 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RPL27P61353 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RPL27P61353 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.28■□□□□ 0.52
RPL27P61353 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPL27P61353 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPL27P61353 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RPL27P61353 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.27■□□□□ 0.52
RPL27P61353 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPL27P61353 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPL27P61353 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPL27P61353 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RPL27P61353 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPL27P61353 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RPL27P61353 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPL27P61353 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
RPL27P61353 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.27■□□□□ 0.52
RPL27P61353 CDV3P1-201ENST00000471403 739 ntBASIC18.27■□□□□ 0.52
RPL27P61353 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.27■□□□□ 0.52
RPL27P61353 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RPL27P61353 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPL27P61353 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
RPL27P61353 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.27■□□□□ 0.52
RPL27P61353 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RPL27P61353 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
RPL27P61353 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.27■□□□□ 0.51
RPL27P61353 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RPL27P61353 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.27■□□□□ 0.51
RPL27P61353 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPL27P61353 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RPL27P61353 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPL27P61353 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPL27P61353 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPL27P61353 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
RPL27P61353 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RPL27P61353 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPL27P61353 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.26■□□□□ 0.51
RPL27P61353 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.26■□□□□ 0.51
RPL27P61353 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.26■□□□□ 0.51
RPL27P61353 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.26■□□□□ 0.51
RPL27P61353 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.26■□□□□ 0.51
RPL27P61353 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
RPL27P61353 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPL27P61353 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPL27P61353 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
RPL27P61353 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPL27P61353 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPL27P61353 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPL27P61353 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RPL27P61353 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RPL27P61353 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPL27P61353 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RPL27P61353 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.25■□□□□ 0.51
RPL27P61353 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RPL27P61353 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPL27P61353 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RPL27P61353 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms