Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.59■□□□□ 0.25
SPCS3P61009 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPCS3P61009 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SPCS3P61009 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.59■□□□□ 0.25
SPCS3P61009 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPCS3P61009 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPCS3P61009 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.59■□□□□ 0.25
SPCS3P61009 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPCS3P61009 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SPCS3P61009 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPCS3P61009 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPCS3P61009 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPCS3P61009 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPCS3P61009 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SPCS3P61009 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPCS3P61009 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC16.58■□□□□ 0.24
SPCS3P61009 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.58■□□□□ 0.24
SPCS3P61009 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SPCS3P61009 AC024257.2-201ENST00000549699 147 ntBASIC16.58■□□□□ 0.24
SPCS3P61009 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.58■□□□□ 0.24
SPCS3P61009 AL136162.1-201ENST00000607711 1078 ntBASIC16.58■□□□□ 0.24
SPCS3P61009 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SPCS3P61009 AP004607.4-201ENST00000530158 1459 ntBASIC16.58■□□□□ 0.24
SPCS3P61009 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPCS3P61009 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.58■□□□□ 0.24
SPCS3P61009 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SPCS3P61009 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SPCS3P61009 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPCS3P61009 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SPCS3P61009 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPCS3P61009 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SPCS3P61009 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPCS3P61009 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SPCS3P61009 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SPCS3P61009 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.57■□□□□ 0.24
SPCS3P61009 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SPCS3P61009 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SPCS3P61009 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPCS3P61009 AL162377.1-201ENST00000618844 1793 ntBASIC16.57■□□□□ 0.24
SPCS3P61009 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC16.57■□□□□ 0.24
SPCS3P61009 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.57■□□□□ 0.24
SPCS3P61009 AC053503.5-201ENST00000601508 636 ntBASIC16.57■□□□□ 0.24
SPCS3P61009 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SPCS3P61009 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPCS3P61009 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPCS3P61009 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPCS3P61009 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.56■□□□□ 0.24
SPCS3P61009 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPCS3P61009 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPCS3P61009 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPCS3P61009 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.56■□□□□ 0.24
SPCS3P61009 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.56■□□□□ 0.24
SPCS3P61009 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
SPCS3P61009 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC16.56■□□□□ 0.24
SPCS3P61009 AC135279.3-201ENST00000610945 1311 ntBASIC16.56■□□□□ 0.24
SPCS3P61009 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPCS3P61009 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.56■□□□□ 0.24
SPCS3P61009 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SPCS3P61009 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPCS3P61009 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SPCS3P61009 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.56■□□□□ 0.24
SPCS3P61009 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
SPCS3P61009 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SPCS3P61009 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SPCS3P61009 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SPCS3P61009 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SPCS3P61009 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.56■□□□□ 0.24
SPCS3P61009 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SPCS3P61009 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC16.56■□□□□ 0.24
SPCS3P61009 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SPCS3P61009 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.56■□□□□ 0.24
SPCS3P61009 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPCS3P61009 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SPCS3P61009 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPCS3P61009 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.55■□□□□ 0.24
SPCS3P61009 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPCS3P61009 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SPCS3P61009 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SPCS3P61009 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.55■□□□□ 0.24
SPCS3P61009 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPCS3P61009 TSPY26P-201ENST00000476365 1326 ntBASIC16.55■□□□□ 0.24
SPCS3P61009 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SPCS3P61009 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC16.55■□□□□ 0.24
SPCS3P61009 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SPCS3P61009 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.55■□□□□ 0.24
SPCS3P61009 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.55■□□□□ 0.24
SPCS3P61009 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPCS3P61009 EEF1DP3-203ENST00000566025 782 ntBASIC16.55■□□□□ 0.24
SPCS3P61009 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC16.55■□□□□ 0.24
SPCS3P61009 AC008764.7-201ENST00000593779 1081 ntBASIC16.55■□□□□ 0.24
SPCS3P61009 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC16.55■□□□□ 0.24
SPCS3P61009 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPCS3P61009 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPCS3P61009 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.55■□□□□ 0.24
SPCS3P61009 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.55■□□□□ 0.24
SPCS3P61009 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.55■□□□□ 0.24
SPCS3P61009 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SPCS3P61009 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPCS3P61009 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPCS3P61009 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms