Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA4P54764 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA4P54764 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
EPHA4P54764 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.75■□□□□ 0.75
EPHA4P54764 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.74■□□□□ 0.75
EPHA4P54764 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA4P54764 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA4P54764 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.74■□□□□ 0.75
EPHA4P54764 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA4P54764 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.74■□□□□ 0.75
EPHA4P54764 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.74■□□□□ 0.75
EPHA4P54764 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.74■□□□□ 0.75
EPHA4P54764 AC066615.1-201ENST00000640911 628 ntBASIC19.74■□□□□ 0.75
EPHA4P54764 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
EPHA4P54764 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA4P54764 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA4P54764 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA4P54764 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA4P54764 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
EPHA4P54764 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA4P54764 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA4P54764 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
EPHA4P54764 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.73■□□□□ 0.75
EPHA4P54764 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA4P54764 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.73■□□□□ 0.75
EPHA4P54764 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.73■□□□□ 0.75
EPHA4P54764 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
EPHA4P54764 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA4P54764 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
EPHA4P54764 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA4P54764 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.73■□□□□ 0.75
EPHA4P54764 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA4P54764 UNC93B4-201ENST00000505679 747 ntBASIC19.73■□□□□ 0.75
EPHA4P54764 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
EPHA4P54764 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
EPHA4P54764 AC008403.3-201ENST00000598924 454 ntBASIC19.73■□□□□ 0.75
EPHA4P54764 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
EPHA4P54764 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA4P54764 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA4P54764 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
EPHA4P54764 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.73■□□□□ 0.75
EPHA4P54764 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.72■□□□□ 0.75
EPHA4P54764 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA4P54764 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA4P54764 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
EPHA4P54764 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA4P54764 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA4P54764 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA4P54764 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA4P54764 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA4P54764 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA4P54764 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.72■□□□□ 0.75
EPHA4P54764 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.72■□□□□ 0.75
EPHA4P54764 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.72■□□□□ 0.75
EPHA4P54764 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.72■□□□□ 0.75
EPHA4P54764 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.72■□□□□ 0.75
EPHA4P54764 FBXW4P1-201ENST00000426721 2239 ntBASIC19.72■□□□□ 0.75
EPHA4P54764 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.72■□□□□ 0.75
EPHA4P54764 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA4P54764 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
EPHA4P54764 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA4P54764 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.71■□□□□ 0.75
EPHA4P54764 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
EPHA4P54764 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA4P54764 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA4P54764 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA4P54764 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA4P54764 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
EPHA4P54764 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA4P54764 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA4P54764 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
EPHA4P54764 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.71■□□□□ 0.75
EPHA4P54764 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.71■□□□□ 0.75
EPHA4P54764 AC073648.6-201ENST00000641589 218 ntBASIC19.71■□□□□ 0.75
EPHA4P54764 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA4P54764 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA4P54764 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
EPHA4P54764 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.71■□□□□ 0.75
EPHA4P54764 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.71■□□□□ 0.75
EPHA4P54764 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.71■□□□□ 0.75
EPHA4P54764 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.7■□□□□ 0.74
EPHA4P54764 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA4P54764 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
EPHA4P54764 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA4P54764 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA4P54764 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA4P54764 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA4P54764 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
EPHA4P54764 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA4P54764 GCSHP5-201ENST00000443090 522 ntBASIC19.7■□□□□ 0.74
EPHA4P54764 AC098590.1-201ENST00000468126 897 ntBASIC19.7■□□□□ 0.74
EPHA4P54764 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.7■□□□□ 0.74
EPHA4P54764 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.7■□□□□ 0.74
EPHA4P54764 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.7■□□□□ 0.74
EPHA4P54764 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA4P54764 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
EPHA4P54764 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA4P54764 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA4P54764 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
EPHA4P54764 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms