Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.08■□□□□ 0.97
PMS2P54278 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PMS2P54278 AC011484.1-201ENST00000377652 1995 ntBASIC21.08■□□□□ 0.97
PMS2P54278 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PMS2P54278 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PMS2P54278 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PMS2P54278 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PMS2P54278 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PMS2P54278 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.08■□□□□ 0.96
PMS2P54278 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
PMS2P54278 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
PMS2P54278 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PMS2P54278 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PMS2P54278 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
PMS2P54278 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PMS2P54278 AC055733.4-201ENST00000638462 1354 ntBASIC21.07■□□□□ 0.96
PMS2P54278 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PMS2P54278 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PMS2P54278 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PMS2P54278 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PMS2P54278 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.06■□□□□ 0.96
PMS2P54278 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PMS2P54278 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.06■□□□□ 0.96
PMS2P54278 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS2P54278 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.06■□□□□ 0.96
PMS2P54278 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.06■□□□□ 0.96
PMS2P54278 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.06■□□□□ 0.96
PMS2P54278 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS2P54278 TCF3P1-201ENST00000423021 1937 ntBASIC21.06■□□□□ 0.96
PMS2P54278 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.06■□□□□ 0.96
PMS2P54278 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS2P54278 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PMS2P54278 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.06■□□□□ 0.96
PMS2P54278 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.06■□□□□ 0.96
PMS2P54278 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS2P54278 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.06■□□□□ 0.96
PMS2P54278 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS2P54278 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS2P54278 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PMS2P54278 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PMS2P54278 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PMS2P54278 AC009237.3-201ENST00000393279 1427 ntBASIC21.05■□□□□ 0.96
PMS2P54278 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PMS2P54278 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PMS2P54278 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.05■□□□□ 0.96
PMS2P54278 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.05■□□□□ 0.96
PMS2P54278 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.05■□□□□ 0.96
PMS2P54278 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PMS2P54278 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PMS2P54278 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.05■□□□□ 0.96
PMS2P54278 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PMS2P54278 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
PMS2P54278 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PMS2P54278 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PMS2P54278 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.04■□□□□ 0.96
PMS2P54278 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PMS2P54278 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.04■□□□□ 0.96
PMS2P54278 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.04■□□□□ 0.96
PMS2P54278 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PMS2P54278 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.04■□□□□ 0.96
PMS2P54278 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PMS2P54278 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
PMS2P54278 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.04■□□□□ 0.96
PMS2P54278 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PMS2P54278 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PMS2P54278 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.03■□□□□ 0.96
PMS2P54278 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.03■□□□□ 0.96
PMS2P54278 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PMS2P54278 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
PMS2P54278 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PMS2P54278 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
PMS2P54278 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PMS2P54278 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PMS2P54278 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.03■□□□□ 0.96
PMS2P54278 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PMS2P54278 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PMS2P54278 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PMS2P54278 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.03■□□□□ 0.96
PMS2P54278 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PMS2P54278 AC092720.2-201ENST00000602388 1665 ntBASIC21.02■□□□□ 0.96
PMS2P54278 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PMS2P54278 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PMS2P54278 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
PMS2P54278 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
PMS2P54278 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.02■□□□□ 0.96
PMS2P54278 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.02■□□□□ 0.96
PMS2P54278 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.02■□□□□ 0.96
PMS2P54278 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PMS2P54278 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PMS2P54278 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PMS2P54278 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PMS2P54278 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.02■□□□□ 0.96
PMS2P54278 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.02■□□□□ 0.96
PMS2P54278 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
PMS2P54278 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.02■□□□□ 0.95
PMS2P54278 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PMS2P54278 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
PMS2P54278 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.01■□□□□ 0.95
PMS2P54278 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.01■□□□□ 0.95
PMS2P54278 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms