Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 YDR034C-DYDR034C-D 5313 nt3.33□□□□□ -1.88
HDA1P53973 GCN1YGL195W 8019 nt3.33□□□□□ -1.88
HDA1P53973 TFB1YDR311W 1929 nt3.32□□□□□ -1.88
HDA1P53973 FUN30YAL019W 3396 nt3.32□□□□□ -1.88
HDA1P53973 ILS1YBL076C 3219 nt3.32□□□□□ -1.88
HDA1P53973 RMT2YDR465C 1239 nt3.32□□□□□ -1.88
HDA1P53973 MSL1YIR009W 336 nt3.32□□□□□ -1.88
HDA1P53973 SMA2YML066C 1110 nt3.32□□□□□ -1.88
HDA1P53973 RPS7AYOR096W 573 nt3.32□□□□□ -1.88
HDA1P53973 NDD1YOR372C 1665 nt3.32□□□□□ -1.88
HDA1P53973 MYO5YMR109W 3660 nt3.32□□□□□ -1.88
HDA1P53973 SIN3YOL004W 4611 nt3.31□□□□□ -1.88
HDA1P53973 VAS1YGR094W 3315 nt3.31□□□□□ -1.88
HDA1P53973 FLO5YHR211W 3228 nt3.31□□□□□ -1.88
HDA1P53973 AST2YER101C 1293 nt3.31□□□□□ -1.88
HDA1P53973 YFL065CYFL065C 309 nt3.31□□□□□ -1.88
HDA1P53973 BAT1YHR208W 1182 nt3.31□□□□□ -1.88
HDA1P53973 YHR214C-EYHR214C-E 300 nt3.31□□□□□ -1.88
HDA1P53973 YAR070CYAR070C 300 nt3.31□□□□□ -1.88
HDA1P53973 COX14YML129C 213 nt3.31□□□□□ -1.88
HDA1P53973 SSY1YDR160W 2559 nt3.31□□□□□ -1.88
HDA1P53973 POL3YDL102W 3294 nt3.31□□□□□ -1.88
HDA1P53973 tT(UGU)Q1tT(UGU)Q1 76 nt3.3□□□□□ -1.88
HDA1P53973 URM1YIL008W 300 nt3.3□□□□□ -1.88
HDA1P53973 AIM32YML050W 936 nt3.3□□□□□ -1.88
HDA1P53973 PRE8YML092C 753 nt3.3□□□□□ -1.88
HDA1P53973 PMR1YGL167C 2853 nt3.3□□□□□ -1.88
HDA1P53973 SIP3YNL257C 3690 nt3.3□□□□□ -1.88
HDA1P53973 ENA5YDR038C 3276 nt3.3□□□□□ -1.88
HDA1P53973 TCP1YDR212W 1680 nt3.3□□□□□ -1.88
HDA1P53973 STE5YDR103W 2754 nt3.29□□□□□ -1.88
HDA1P53973 YJL202CYJL202C 348 nt3.29□□□□□ -1.88
HDA1P53973 SSN8YNL025C 972 nt3.29□□□□□ -1.88
HDA1P53973 snR191snR191 274 nt3.29□□□□□ -1.88
HDA1P53973 CDH1YGL003C 1701 nt3.29□□□□□ -1.88
HDA1P53973 NPR1YNL183C 2373 nt3.29□□□□□ -1.88
HDA1P53973 SQS1YNL224C 2304 nt3.28□□□□□ -1.88
HDA1P53973 VPS3YDR495C 3036 nt3.28□□□□□ -1.88
HDA1P53973 IOC3YFR013W 2364 nt3.28□□□□□ -1.88
HDA1P53973 YER039C-AYER039C-A 219 nt3.28□□□□□ -1.88
HDA1P53973 AAD16YFL057C 459 nt3.28□□□□□ -1.88
HDA1P53973 HOP2YGL033W 657 nt3.28□□□□□ -1.88
HDA1P53973 YHL005CYHL005C 393 nt3.28□□□□□ -1.88
HDA1P53973 TIM8YJR135W-A 264 nt3.28□□□□□ -1.88
HDA1P53973 RPS28BYLR264W 204 nt3.28□□□□□ -1.88
HDA1P53973 YMR320WYMR320W 306 nt3.28□□□□□ -1.88
HDA1P53973 EGD1YPL037C 474 nt3.28□□□□□ -1.88
HDA1P53973 YPR014CYPR014C 330 nt3.28□□□□□ -1.88
HDA1P53973 CSR2YPR030W 3366 nt3.28□□□□□ -1.88
HDA1P53973 YIL169CYIL169C 2988 nt3.27□□□□□ -1.89
HDA1P53973 APC11YDL008W 498 nt3.27□□□□□ -1.89
HDA1P53973 RPS23AYGR118W 438 nt3.27□□□□□ -1.89
HDA1P53973 PEX4YGR133W 552 nt3.27□□□□□ -1.89
HDA1P53973 SHE2YKL130C 741 nt3.27□□□□□ -1.89
HDA1P53973 LEU3YLR451W 2661 nt3.27□□□□□ -1.89
HDA1P53973 YHR063W-AYHR063W-A 336 nt3.26□□□□□ -1.89
HDA1P53973 tW(UCA)QtW(UCA)Q 74 nt3.26□□□□□ -1.89
HDA1P53973 YMR290W-AYMR290W-A 348 nt3.26□□□□□ -1.89
HDA1P53973 RPL9BYNL067W 576 nt3.26□□□□□ -1.89
HDA1P53973 SWD3YBR175W 948 nt3.26□□□□□ -1.89
HDA1P53973 RAX2YLR084C 3663 nt3.25□□□□□ -1.89
HDA1P53973 CAJ1YER048C 1176 nt3.25□□□□□ -1.89
HDA1P53973 YHL006W-AYHL006W-A 354 nt3.25□□□□□ -1.89
HDA1P53973 IRC23YOR044W 474 nt3.25□□□□□ -1.89
HDA1P53973 COX1Q0045 1605 nt3.25□□□□□ -1.89
HDA1P53973 NAB6YML117W 3405 nt3.25□□□□□ -1.89
HDA1P53973 YNL034WYNL034W 1839 nt3.24□□□□□ -1.89
HDA1P53973 RSE1YML049C 4086 nt3.24□□□□□ -1.89
HDA1P53973 RPS22BYLR367W 393 nt3.24□□□□□ -1.89
HDA1P53973 PGA1YNL158W 597 nt3.24□□□□□ -1.89
HDA1P53973 ESF2YNR054C 951 nt3.24□□□□□ -1.89
HDA1P53973 RPL20BYOR312C 519 nt3.24□□□□□ -1.89
HDA1P53973 YPR010C-AYPR010C-A 219 nt3.24□□□□□ -1.89
HDA1P53973 YDR210W-BYDR210W-B 5313 nt3.24□□□□□ -1.89
HDA1P53973 YDR261W-BYDR261W-B 5313 nt3.24□□□□□ -1.89
HDA1P53973 YFL002W-AYFL002W-A 5313 nt3.24□□□□□ -1.89
HDA1P53973 YGR161W-BYGR161W-B 5313 nt3.24□□□□□ -1.89
HDA1P53973 YLR410W-BYLR410W-B 5313 nt3.24□□□□□ -1.89
HDA1P53973 YCL019WYCL019W 5313 nt3.24□□□□□ -1.89
HDA1P53973 ECM5YMR176W 4236 nt3.24□□□□□ -1.89
HDA1P53973 YAK1YJL141C 2424 nt3.23□□□□□ -1.89
HDA1P53973 YIL058WYIL058W 285 nt3.23□□□□□ -1.89
HDA1P53973 PFK26YIL107C 2484 nt3.23□□□□□ -1.89
HDA1P53973 PAU14YIL176C 363 nt3.23□□□□□ -1.89
HDA1P53973 PAU1YJL223C 363 nt3.23□□□□□ -1.89
HDA1P53973 YLR031WYLR031W 561 nt3.23□□□□□ -1.89
HDA1P53973 COX7YMR256C 183 nt3.23□□□□□ -1.89
HDA1P53973 EXO84YBR102C 2262 nt3.23□□□□□ -1.89
HDA1P53973 BCH1YMR237W 2175 nt3.22□□□□□ -1.89
HDA1P53973 RPS17BYDR447C 411 nt3.22□□□□□ -1.89
HDA1P53973 HPA3YEL066W 540 nt3.22□□□□□ -1.89
HDA1P53973 ERP6YGL002W 651 nt3.22□□□□□ -1.89
HDA1P53973 YML037CYML037C 1023 nt3.22□□□□□ -1.89
HDA1P53973 RPL6AYML073C 531 nt3.22□□□□□ -1.89
HDA1P53973 COG3YER157W 2406 nt3.22□□□□□ -1.89
HDA1P53973 TPS2YDR074W 2691 nt3.22□□□□□ -1.89
HDA1P53973 RPA190YOR341W 4995 nt3.21□□□□□ -1.89
HDA1P53973 RIF1YBR275C 5751 nt3.21□□□□□ -1.9
HDA1P53973 YJL016WYJL016W 1686 nt3.21□□□□□ -1.9
HDA1P53973 YFR056CYFR056C 369 nt3.21□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 80.3 ms