Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.7■□□□□ 0.58
HMGA2P52926 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.7■□□□□ 0.58
HMGA2P52926 AL354811.1-201ENST00000610286 706 ntBASIC18.7■□□□□ 0.58
HMGA2P52926 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HMGA2P52926 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGA2P52926 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
HMGA2P52926 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HMGA2P52926 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGA2P52926 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGA2P52926 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGA2P52926 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGA2P52926 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGA2P52926 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGA2P52926 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGA2P52926 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGA2P52926 AC091305.1-201ENST00000479476 895 ntBASIC18.69■□□□□ 0.58
HMGA2P52926 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGA2P52926 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGA2P52926 KRT87P-202ENST00000534226 1464 ntBASIC18.69■□□□□ 0.58
HMGA2P52926 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGA2P52926 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.69■□□□□ 0.58
HMGA2P52926 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGA2P52926 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGA2P52926 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HMGA2P52926 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
HMGA2P52926 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.69■□□□□ 0.58
HMGA2P52926 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
HMGA2P52926 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
HMGA2P52926 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.69■□□□□ 0.58
HMGA2P52926 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGA2P52926 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGA2P52926 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGA2P52926 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGA2P52926 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGA2P52926 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGA2P52926 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGA2P52926 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.68■□□□□ 0.58
HMGA2P52926 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.68■□□□□ 0.58
HMGA2P52926 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HMGA2P52926 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
HMGA2P52926 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGA2P52926 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.68■□□□□ 0.58
HMGA2P52926 AL136967.2-201ENST00000623968 743 ntBASIC18.68■□□□□ 0.58
HMGA2P52926 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGA2P52926 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.68■□□□□ 0.58
HMGA2P52926 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.68■□□□□ 0.58
HMGA2P52926 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HMGA2P52926 BX323043.1-201ENST00000641006 1765 ntBASIC18.68■□□□□ 0.58
HMGA2P52926 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGA2P52926 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGA2P52926 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGA2P52926 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGA2P52926 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGA2P52926 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGA2P52926 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGA2P52926 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HMGA2P52926 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGA2P52926 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HMGA2P52926 AC096631.2-201ENST00000436136 790 ntBASIC18.67■□□□□ 0.58
HMGA2P52926 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.67■□□□□ 0.58
HMGA2P52926 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGA2P52926 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGA2P52926 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGA2P52926 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.67■□□□□ 0.58
HMGA2P52926 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
HMGA2P52926 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGA2P52926 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HMGA2P52926 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HMGA2P52926 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.67■□□□□ 0.58
HMGA2P52926 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGA2P52926 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.67■□□□□ 0.58
HMGA2P52926 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HMGA2P52926 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HMGA2P52926 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HMGA2P52926 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HMGA2P52926 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGA2P52926 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGA2P52926 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGA2P52926 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HMGA2P52926 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGA2P52926 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGA2P52926 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGA2P52926 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGA2P52926 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGA2P52926 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HMGA2P52926 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGA2P52926 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGA2P52926 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.66■□□□□ 0.58
HMGA2P52926 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGA2P52926 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGA2P52926 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.66■□□□□ 0.58
HMGA2P52926 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGA2P52926 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HMGA2P52926 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HMGA2P52926 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HMGA2P52926 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGA2P52926 AC116562.4-201ENST00000641316 2276 ntBASIC18.65■□□□□ 0.58
HMGA2P52926 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGA2P52926 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HMGA2P52926 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms