Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FEM1AP1-201ENST00000431297 1995 ntBASIC18.99■□□□□ 0.63
RNF144AP50876 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144AP50876 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144AP50876 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144AP50876 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144AP50876 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144AP50876 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144AP50876 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF144AP50876 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144AP50876 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
RNF144AP50876 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144AP50876 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF144AP50876 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
RNF144AP50876 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF144AP50876 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF144AP50876 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RNF144AP50876 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 AC016769.1-201ENST00000409132 1010 ntBASIC18.98■□□□□ 0.63
RNF144AP50876 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.98■□□□□ 0.63
RNF144AP50876 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF144AP50876 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.98■□□□□ 0.63
RNF144AP50876 IKBKGP1-201ENST00000612193 1073 ntBASIC18.98■□□□□ 0.63
RNF144AP50876 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF144AP50876 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF144AP50876 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 RBM17P2-201ENST00000616397 1405 ntBASIC18.98■□□□□ 0.63
RNF144AP50876 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF144AP50876 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144AP50876 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RNF144AP50876 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RNF144AP50876 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RNF144AP50876 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RNF144AP50876 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144AP50876 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF144AP50876 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RNF144AP50876 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144AP50876 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144AP50876 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144AP50876 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RNF144AP50876 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144AP50876 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144AP50876 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF144AP50876 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RNF144AP50876 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.97■□□□□ 0.63
RNF144AP50876 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF144AP50876 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF144AP50876 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF144AP50876 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144AP50876 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144AP50876 AC011484.1-201ENST00000377652 1995 ntBASIC18.97■□□□□ 0.63
RNF144AP50876 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144AP50876 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144AP50876 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF144AP50876 AC007225.1-201ENST00000566331 1836 ntBASIC18.96■□□□□ 0.63
RNF144AP50876 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF144AP50876 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF144AP50876 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF144AP50876 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF144AP50876 KRT18P20-201ENST00000548986 1279 ntBASIC18.96■□□□□ 0.63
RNF144AP50876 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.96■□□□□ 0.63
RNF144AP50876 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF144AP50876 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF144AP50876 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF144AP50876 AC027702.1-201ENST00000563810 1770 ntBASIC18.96■□□□□ 0.63
RNF144AP50876 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF144AP50876 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RNF144AP50876 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144AP50876 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RNF144AP50876 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RNF144AP50876 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144AP50876 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF144AP50876 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144AP50876 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF144AP50876 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144AP50876 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
RNF144AP50876 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144AP50876 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144AP50876 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144AP50876 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144AP50876 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
RNF144AP50876 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF144AP50876 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF144AP50876 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144AP50876 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144AP50876 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF144AP50876 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.94■□□□□ 0.62
RNF144AP50876 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
RNF144AP50876 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF144AP50876 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms