Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CDK9P50750 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CDK9P50750 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CDK9P50750 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK9P50750 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK9P50750 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK9P50750 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK9P50750 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK9P50750 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK9P50750 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.63■□□□□ 0.73
CDK9P50750 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.63■□□□□ 0.73
CDK9P50750 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK9P50750 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDK9P50750 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.63■□□□□ 0.73
CDK9P50750 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
CDK9P50750 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDK9P50750 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.63■□□□□ 0.73
CDK9P50750 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CDK9P50750 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CDK9P50750 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK9P50750 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CDK9P50750 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.62■□□□□ 0.73
CDK9P50750 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.62■□□□□ 0.73
CDK9P50750 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK9P50750 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 AC092666.2-201ENST00000613287 246 ntBASIC19.62■□□□□ 0.73
CDK9P50750 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDK9P50750 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.62■□□□□ 0.73
CDK9P50750 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDK9P50750 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CDK9P50750 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK9P50750 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDK9P50750 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CDK9P50750 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK9P50750 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK9P50750 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK9P50750 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK9P50750 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK9P50750 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CDK9P50750 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
CDK9P50750 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.61■□□□□ 0.73
CDK9P50750 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.61■□□□□ 0.73
CDK9P50750 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDK9P50750 KRT18P5-201ENST00000436075 1291 ntBASIC19.61■□□□□ 0.73
CDK9P50750 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.61■□□□□ 0.73
CDK9P50750 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK9P50750 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.61■□□□□ 0.73
CDK9P50750 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK9P50750 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.61■□□□□ 0.73
CDK9P50750 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CDK9P50750 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CDK9P50750 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.61■□□□□ 0.73
CDK9P50750 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDK9P50750 GABARAPL3-202ENST00000624044 1851 ntBASIC19.6■□□□□ 0.73
CDK9P50750 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK9P50750 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK9P50750 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK9P50750 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK9P50750 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK9P50750 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK9P50750 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDK9P50750 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK9P50750 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CDK9P50750 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDK9P50750 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDK9P50750 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CDK9P50750 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK9P50750 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.6■□□□□ 0.73
CDK9P50750 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDK9P50750 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
CDK9P50750 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
CDK9P50750 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK9P50750 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.59■□□□□ 0.73
CDK9P50750 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK9P50750 PLK5-205ENST00000642079 1969 ntBASIC19.59■□□□□ 0.73
CDK9P50750 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK9P50750 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK9P50750 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK9P50750 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDK9P50750 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.59■□□□□ 0.73
CDK9P50750 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK9P50750 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK9P50750 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.59■□□□□ 0.73
CDK9P50750 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK9P50750 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDK9P50750 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDK9P50750 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms