Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CPT1AP50416 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.82■■□□□ 1.24
CPT1AP50416 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.82■■□□□ 1.24
CPT1AP50416 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.82■■□□□ 1.24
CPT1AP50416 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.82■■□□□ 1.24
CPT1AP50416 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CPT1AP50416 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CPT1AP50416 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.81■■□□□ 1.24
CPT1AP50416 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.81■■□□□ 1.24
CPT1AP50416 RPS2P55-201ENST00000397318 883 ntBASIC22.81■■□□□ 1.24
CPT1AP50416 AC107956.1-201ENST00000494359 873 ntBASIC22.81■■□□□ 1.24
CPT1AP50416 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.81■■□□□ 1.24
CPT1AP50416 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.81■■□□□ 1.24
CPT1AP50416 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.81■■□□□ 1.24
CPT1AP50416 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC22.81■■□□□ 1.24
CPT1AP50416 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CPT1AP50416 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CPT1AP50416 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CPT1AP50416 AC233723.2-201ENST00000623798 2106 ntBASIC22.81■■□□□ 1.24
CPT1AP50416 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
CPT1AP50416 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CPT1AP50416 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CPT1AP50416 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.8■■□□□ 1.24
CPT1AP50416 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.8■■□□□ 1.24
CPT1AP50416 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CPT1AP50416 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CPT1AP50416 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CPT1AP50416 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.8■■□□□ 1.24
CPT1AP50416 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.8■■□□□ 1.24
CPT1AP50416 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC22.8■■□□□ 1.24
CPT1AP50416 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CPT1AP50416 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC22.8■■□□□ 1.24
CPT1AP50416 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CPT1AP50416 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.8■■□□□ 1.24
CPT1AP50416 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.8■■□□□ 1.24
CPT1AP50416 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CPT1AP50416 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
CPT1AP50416 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CPT1AP50416 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CPT1AP50416 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.79■■□□□ 1.24
CPT1AP50416 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CPT1AP50416 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CPT1AP50416 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CPT1AP50416 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CPT1AP50416 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CPT1AP50416 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.79■■□□□ 1.24
CPT1AP50416 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.79■■□□□ 1.24
CPT1AP50416 AP001412.1-201ENST00000608405 714 ntBASIC22.79■■□□□ 1.24
CPT1AP50416 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CPT1AP50416 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CPT1AP50416 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.79■■□□□ 1.24
CPT1AP50416 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CPT1AP50416 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
CPT1AP50416 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
CPT1AP50416 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
CPT1AP50416 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC22.78■■□□□ 1.24
CPT1AP50416 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.78■■□□□ 1.24
CPT1AP50416 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CPT1AP50416 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.78■■□□□ 1.24
CPT1AP50416 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.78■■□□□ 1.24
CPT1AP50416 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
CPT1AP50416 AL135905.2-201ENST00000584934 1404 ntBASIC22.78■■□□□ 1.24
CPT1AP50416 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
CPT1AP50416 AC110285.5-201ENST00000611501 352 ntBASIC22.78■■□□□ 1.24
CPT1AP50416 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.78■■□□□ 1.24
CPT1AP50416 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CPT1AP50416 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CPT1AP50416 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CPT1AP50416 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
CPT1AP50416 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
CPT1AP50416 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CPT1AP50416 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.77■■□□□ 1.24
CPT1AP50416 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CPT1AP50416 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CPT1AP50416 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CPT1AP50416 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.77■■□□□ 1.24
CPT1AP50416 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
CPT1AP50416 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.77■■□□□ 1.23
CPT1AP50416 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.23
CPT1AP50416 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.77■■□□□ 1.23
CPT1AP50416 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
CPT1AP50416 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.76■■□□□ 1.23
CPT1AP50416 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.76■■□□□ 1.23
CPT1AP50416 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
CPT1AP50416 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CPT1AP50416 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
CPT1AP50416 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CPT1AP50416 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CPT1AP50416 KRASP1-201ENST00000407852 552 ntBASIC22.76■■□□□ 1.23
CPT1AP50416 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.76■■□□□ 1.23
CPT1AP50416 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CPT1AP50416 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CPT1AP50416 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.76■■□□□ 1.23
CPT1AP50416 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CPT1AP50416 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
CPT1AP50416 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.76■■□□□ 1.23
CPT1AP50416 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CPT1AP50416 KRT17P2-201ENST00000300992 1314 ntBASIC22.76■■□□□ 1.23
CPT1AP50416 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CPT1AP50416 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms