Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ATRXP46100 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATRXP46100 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.87■□□□□ 0.61
ATRXP46100 RN7SL510P-201ENST00000581311 263 ntBASIC18.87■□□□□ 0.61
ATRXP46100 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.87■□□□□ 0.61
ATRXP46100 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATRXP46100 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
ATRXP46100 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATRXP46100 AC003102.1-202ENST00000563394 1796 ntBASIC18.87■□□□□ 0.61
ATRXP46100 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ATRXP46100 KRT8P45-201ENST00000414328 1447 ntBASIC18.87■□□□□ 0.61
ATRXP46100 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ATRXP46100 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.86■□□□□ 0.61
ATRXP46100 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ATRXP46100 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.86■□□□□ 0.61
ATRXP46100 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.86■□□□□ 0.61
ATRXP46100 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATRXP46100 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATRXP46100 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.86■□□□□ 0.61
ATRXP46100 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.86■□□□□ 0.61
ATRXP46100 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATRXP46100 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATRXP46100 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ATRXP46100 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
ATRXP46100 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ATRXP46100 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATRXP46100 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ATRXP46100 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.85■□□□□ 0.61
ATRXP46100 CDV3P1-201ENST00000471403 739 ntBASIC18.85■□□□□ 0.61
ATRXP46100 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.85■□□□□ 0.61
ATRXP46100 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
ATRXP46100 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATRXP46100 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.85■□□□□ 0.61
ATRXP46100 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATRXP46100 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATRXP46100 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATRXP46100 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATRXP46100 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.85■□□□□ 0.61
ATRXP46100 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.85■□□□□ 0.61
ATRXP46100 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
ATRXP46100 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATRXP46100 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATRXP46100 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ATRXP46100 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ATRXP46100 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATRXP46100 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATRXP46100 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.84■□□□□ 0.61
ATRXP46100 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.84■□□□□ 0.61
ATRXP46100 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATRXP46100 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.84■□□□□ 0.61
ATRXP46100 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ATRXP46100 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATRXP46100 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
ATRXP46100 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
ATRXP46100 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.84■□□□□ 0.61
ATRXP46100 C11orf96-202ENST00000528572 1834 ntBASIC18.84■□□□□ 0.61
ATRXP46100 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATRXP46100 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATRXP46100 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATRXP46100 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.84■□□□□ 0.61
ATRXP46100 AC245052.3-201ENST00000450182 901 ntBASIC18.84■□□□□ 0.61
ATRXP46100 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.84■□□□□ 0.61
ATRXP46100 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.84■□□□□ 0.61
ATRXP46100 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.84■□□□□ 0.61
ATRXP46100 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.83■□□□□ 0.61
ATRXP46100 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.83■□□□□ 0.61
ATRXP46100 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.83■□□□□ 0.61
ATRXP46100 AF186192.3-201ENST00000583427 947 ntBASIC18.83■□□□□ 0.61
ATRXP46100 AP000525.1-201ENST00000608286 694 ntBASIC18.83■□□□□ 0.61
ATRXP46100 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.83■□□□□ 0.61
ATRXP46100 AC087633.2-202ENST00000565166 1439 ntBASIC18.83■□□□□ 0.61
ATRXP46100 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.83■□□□□ 0.61
ATRXP46100 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATRXP46100 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATRXP46100 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATRXP46100 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.83■□□□□ 0.6
ATRXP46100 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATRXP46100 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.83■□□□□ 0.6
ATRXP46100 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
ATRXP46100 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
ATRXP46100 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATRXP46100 AC079598.2-202ENST00000546624 1451 ntBASIC18.83■□□□□ 0.6
ATRXP46100 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATRXP46100 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATRXP46100 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATRXP46100 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.83■□□□□ 0.6
ATRXP46100 AC092068.2-201ENST00000590491 1708 ntBASIC18.83■□□□□ 0.6
ATRXP46100 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ATRXP46100 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATRXP46100 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.82■□□□□ 0.6
ATRXP46100 AL390955.1-201ENST00000428694 934 ntBASIC18.82■□□□□ 0.6
ATRXP46100 NUDT16P1-203ENST00000513809 620 ntBASIC18.82■□□□□ 0.6
ATRXP46100 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.82■□□□□ 0.6
ATRXP46100 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.82■□□□□ 0.6
ATRXP46100 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ATRXP46100 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.82■□□□□ 0.6
ATRXP46100 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.82■□□□□ 0.6
ATRXP46100 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATRXP46100 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.82■□□□□ 0.6
ATRXP46100 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms