Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SSR1P43307 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR1P43307 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.66■■□□□ 1.06
SSR1P43307 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SSR1P43307 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.66■■□□□ 1.06
SSR1P43307 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SSR1P43307 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SSR1P43307 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.66■■□□□ 1.06
SSR1P43307 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.66■■□□□ 1.06
SSR1P43307 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR1P43307 AC007225.1-201ENST00000566331 1836 ntBASIC21.66■■□□□ 1.06
SSR1P43307 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR1P43307 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR1P43307 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SSR1P43307 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR1P43307 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SSR1P43307 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.65■■□□□ 1.06
SSR1P43307 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.65■■□□□ 1.06
SSR1P43307 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR1P43307 KRT16P2-201ENST00000414673 1423 ntBASIC21.65■■□□□ 1.06
SSR1P43307 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SSR1P43307 AC004854.2-201ENST00000608450 1441 ntBASIC21.65■■□□□ 1.06
SSR1P43307 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR1P43307 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR1P43307 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR1P43307 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.65■■□□□ 1.06
SSR1P43307 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR1P43307 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR1P43307 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.65■■□□□ 1.06
SSR1P43307 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.65■■□□□ 1.06
SSR1P43307 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.65■■□□□ 1.06
SSR1P43307 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR1P43307 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.65■■□□□ 1.06
SSR1P43307 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.65■■□□□ 1.06
SSR1P43307 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.65■■□□□ 1.06
SSR1P43307 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR1P43307 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
SSR1P43307 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SSR1P43307 AC011484.1-201ENST00000377652 1995 ntBASIC21.65■■□□□ 1.06
SSR1P43307 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.65■■□□□ 1.06
SSR1P43307 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SSR1P43307 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.64■■□□□ 1.06
SSR1P43307 AC073314.1-201ENST00000568729 2216 ntBASIC21.64■■□□□ 1.06
SSR1P43307 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SSR1P43307 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
SSR1P43307 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
SSR1P43307 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SSR1P43307 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSR1P43307 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SSR1P43307 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSR1P43307 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SSR1P43307 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SSR1P43307 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SSR1P43307 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SSR1P43307 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SSR1P43307 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SSR1P43307 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.63■■□□□ 1.05
SSR1P43307 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.63■■□□□ 1.05
SSR1P43307 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.63■■□□□ 1.05
SSR1P43307 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SSR1P43307 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SSR1P43307 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SSR1P43307 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.63■■□□□ 1.05
SSR1P43307 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.63■■□□□ 1.05
SSR1P43307 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.63■■□□□ 1.05
SSR1P43307 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.63■■□□□ 1.05
SSR1P43307 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SSR1P43307 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.62■■□□□ 1.05
SSR1P43307 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR1P43307 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
SSR1P43307 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR1P43307 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
SSR1P43307 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR1P43307 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR1P43307 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.62■■□□□ 1.05
SSR1P43307 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR1P43307 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR1P43307 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SSR1P43307 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR1P43307 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.62■■□□□ 1.05
SSR1P43307 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.62■■□□□ 1.05
SSR1P43307 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR1P43307 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR1P43307 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SSR1P43307 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
SSR1P43307 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SSR1P43307 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms