Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RPL13AP40429 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RPL13AP40429 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.11□□□□□ -0.15
RPL13AP40429 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.11□□□□□ -0.15
RPL13AP40429 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
RPL13AP40429 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 OXCT2P1-201ENST00000447263 1535 ntBASIC14.11□□□□□ -0.15
RPL13AP40429 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.11□□□□□ -0.15
RPL13AP40429 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
RPL13AP40429 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RPL13AP40429 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RPL13AP40429 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14.11□□□□□ -0.15
RPL13AP40429 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.11□□□□□ -0.15
RPL13AP40429 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.11□□□□□ -0.15
RPL13AP40429 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RPL13AP40429 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.11□□□□□ -0.15
RPL13AP40429 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RPL13AP40429 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RPL13AP40429 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC14.1□□□□□ -0.15
RPL13AP40429 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC14.1□□□□□ -0.15
RPL13AP40429 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.1□□□□□ -0.15
RPL13AP40429 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC14.1□□□□□ -0.15
RPL13AP40429 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RPL13AP40429 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
RPL13AP40429 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.1□□□□□ -0.15
RPL13AP40429 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RPL13AP40429 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RPL13AP40429 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RPL13AP40429 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RPL13AP40429 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.1□□□□□ -0.15
RPL13AP40429 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RPL13AP40429 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
RPL13AP40429 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
RPL13AP40429 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC14.1□□□□□ -0.15
RPL13AP40429 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RPL13AP40429 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.1□□□□□ -0.15
RPL13AP40429 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.09□□□□□ -0.15
RPL13AP40429 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RPL13AP40429 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL13AP40429 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL13AP40429 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
RPL13AP40429 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.09□□□□□ -0.15
RPL13AP40429 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL13AP40429 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC14.09□□□□□ -0.15
RPL13AP40429 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.09□□□□□ -0.15
RPL13AP40429 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.09□□□□□ -0.15
RPL13AP40429 PVT1_1.1-201ENST00000615125 194 ntBASIC14.09□□□□□ -0.15
RPL13AP40429 AL035685.1-201ENST00000636663 812 ntBASIC14.09□□□□□ -0.15
RPL13AP40429 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL13AP40429 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPL13AP40429 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL13AP40429 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPL13AP40429 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL13AP40429 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RPL13AP40429 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RPL13AP40429 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RPL13AP40429 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL13AP40429 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RPL13AP40429 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RPL13AP40429 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms