Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDNFP39905 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
GDNFP39905 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
GDNFP39905 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDNFP39905 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDNFP39905 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.78■□□□□ 0.44
GDNFP39905 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.78■□□□□ 0.44
GDNFP39905 AC027682.1-201ENST00000562846 899 ntBASIC17.78■□□□□ 0.44
GDNFP39905 AC133561.4-201ENST00000566112 224 ntBASIC17.78■□□□□ 0.44
GDNFP39905 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.78■□□□□ 0.44
GDNFP39905 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.78■□□□□ 0.44
GDNFP39905 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
GDNFP39905 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
GDNFP39905 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDNFP39905 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDNFP39905 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
GDNFP39905 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDNFP39905 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDNFP39905 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDNFP39905 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDNFP39905 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.77■□□□□ 0.44
GDNFP39905 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDNFP39905 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDNFP39905 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
GDNFP39905 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GDNFP39905 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDNFP39905 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.77■□□□□ 0.44
GDNFP39905 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.77■□□□□ 0.44
GDNFP39905 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDNFP39905 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDNFP39905 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDNFP39905 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.77■□□□□ 0.44
GDNFP39905 SUDS3P1-201ENST00000505831 966 ntBASIC17.77■□□□□ 0.44
GDNFP39905 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GDNFP39905 AL136967.2-201ENST00000623968 743 ntBASIC17.77■□□□□ 0.44
GDNFP39905 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDNFP39905 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDNFP39905 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDNFP39905 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GDNFP39905 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.77■□□□□ 0.43
GDNFP39905 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GDNFP39905 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.77■□□□□ 0.43
GDNFP39905 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
GDNFP39905 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
GDNFP39905 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
GDNFP39905 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.77■□□□□ 0.43
GDNFP39905 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.77■□□□□ 0.43
GDNFP39905 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDNFP39905 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.76■□□□□ 0.43
GDNFP39905 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.76■□□□□ 0.43
GDNFP39905 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDNFP39905 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDNFP39905 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDNFP39905 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.76■□□□□ 0.43
GDNFP39905 IGHV3-19-201ENST00000521488 291 ntBASIC17.76■□□□□ 0.43
GDNFP39905 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.76■□□□□ 0.43
GDNFP39905 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.76■□□□□ 0.43
GDNFP39905 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
GDNFP39905 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
GDNFP39905 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.76■□□□□ 0.43
GDNFP39905 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.76■□□□□ 0.43
GDNFP39905 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDNFP39905 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
GDNFP39905 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GDNFP39905 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDNFP39905 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDNFP39905 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDNFP39905 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDNFP39905 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDNFP39905 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
GDNFP39905 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDNFP39905 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
GDNFP39905 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.75■□□□□ 0.43
GDNFP39905 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.75■□□□□ 0.43
GDNFP39905 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GDNFP39905 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GDNFP39905 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.75■□□□□ 0.43
GDNFP39905 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDNFP39905 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GDNFP39905 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GDNFP39905 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
GDNFP39905 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDNFP39905 TSPY26P-201ENST00000476365 1326 ntBASIC17.74■□□□□ 0.43
GDNFP39905 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.74■□□□□ 0.43
GDNFP39905 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
GDNFP39905 FP700111.2-201ENST00000619190 1892 ntBASIC17.74■□□□□ 0.43
GDNFP39905 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.74■□□□□ 0.43
GDNFP39905 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDNFP39905 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDNFP39905 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.74■□□□□ 0.43
GDNFP39905 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDNFP39905 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.74■□□□□ 0.43
GDNFP39905 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
GDNFP39905 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.74■□□□□ 0.43
GDNFP39905 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDNFP39905 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDNFP39905 RASA4CP-201ENST00000424092 1398 ntBASIC17.74■□□□□ 0.43
GDNFP39905 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDNFP39905 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GDNFP39905 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms