Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC068587.7-201ENST00000641602 218 ntBASIC23.22■■□□□ 1.31
CLCN1P35523 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
CLCN1P35523 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.22■■□□□ 1.31
CLCN1P35523 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.22■■□□□ 1.31
CLCN1P35523 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC23.22■■□□□ 1.31
CLCN1P35523 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CLCN1P35523 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCN1P35523 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCN1P35523 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCN1P35523 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
CLCN1P35523 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
CLCN1P35523 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.21■■□□□ 1.31
CLCN1P35523 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
CLCN1P35523 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.21■■□□□ 1.31
CLCN1P35523 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.21■■□□□ 1.31
CLCN1P35523 AC008406.3-201ENST00000620001 1374 ntBASIC23.21■■□□□ 1.31
CLCN1P35523 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCN1P35523 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCN1P35523 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC23.21■■□□□ 1.31
CLCN1P35523 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCN1P35523 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CLCN1P35523 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CLCN1P35523 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CLCN1P35523 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCN1P35523 PLK5-205ENST00000642079 1969 ntBASIC23.2■■□□□ 1.3
CLCN1P35523 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCN1P35523 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCN1P35523 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
CLCN1P35523 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCN1P35523 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CLCN1P35523 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.2■■□□□ 1.3
CLCN1P35523 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC23.2■■□□□ 1.3
CLCN1P35523 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC23.2■■□□□ 1.3
CLCN1P35523 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCN1P35523 AL049812.1-201ENST00000432563 2267 ntBASIC23.2■■□□□ 1.3
CLCN1P35523 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCN1P35523 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCN1P35523 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CLCN1P35523 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.19■■□□□ 1.3
CLCN1P35523 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CLCN1P35523 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CLCN1P35523 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.19■■□□□ 1.3
CLCN1P35523 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 AC024257.2-201ENST00000549699 147 ntBASIC23.19■■□□□ 1.3
CLCN1P35523 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.19■■□□□ 1.3
CLCN1P35523 MIR4767-201ENST00000582827 78 ntBASIC23.19■■□□□ 1.3
CLCN1P35523 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CLCN1P35523 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.19■■□□□ 1.3
CLCN1P35523 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
CLCN1P35523 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CLCN1P35523 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN1P35523 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN1P35523 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN1P35523 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN1P35523 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN1P35523 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN1P35523 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN1P35523 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN1P35523 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CLCN1P35523 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.18■■□□□ 1.3
CLCN1P35523 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.18■■□□□ 1.3
CLCN1P35523 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN1P35523 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN1P35523 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CLCN1P35523 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
CLCN1P35523 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.18■■□□□ 1.3
CLCN1P35523 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN1P35523 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN1P35523 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN1P35523 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN1P35523 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.17■■□□□ 1.3
CLCN1P35523 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.17■■□□□ 1.3
CLCN1P35523 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CLCN1P35523 AC010141.3-201ENST00000456659 717 ntBASIC23.17■■□□□ 1.3
CLCN1P35523 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN1P35523 AL136162.1-201ENST00000607711 1078 ntBASIC23.17■■□□□ 1.3
CLCN1P35523 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN1P35523 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN1P35523 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN1P35523 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN1P35523 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CLCN1P35523 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CLCN1P35523 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCN1P35523 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC23.16■■□□□ 1.3
CLCN1P35523 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCN1P35523 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCN1P35523 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CLCN1P35523 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms