Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CHATP28329 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.4■□□□□ 0.38
CHATP28329 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.4■□□□□ 0.38
CHATP28329 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.4■□□□□ 0.38
CHATP28329 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.4■□□□□ 0.38
CHATP28329 AL512408.1-201ENST00000569378 2000 ntBASIC17.4■□□□□ 0.38
CHATP28329 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CHATP28329 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.4■□□□□ 0.38
CHATP28329 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.4■□□□□ 0.38
CHATP28329 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.4■□□□□ 0.38
CHATP28329 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CHATP28329 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.4■□□□□ 0.38
CHATP28329 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
CHATP28329 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHATP28329 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CHATP28329 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHATP28329 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHATP28329 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CHATP28329 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.39■□□□□ 0.37
CHATP28329 AL354811.1-201ENST00000610286 706 ntBASIC17.39■□□□□ 0.37
CHATP28329 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.39■□□□□ 0.37
CHATP28329 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHATP28329 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
CHATP28329 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.39■□□□□ 0.37
CHATP28329 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHATP28329 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHATP28329 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.39■□□□□ 0.37
CHATP28329 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CHATP28329 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.39■□□□□ 0.37
CHATP28329 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CHATP28329 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.38■□□□□ 0.37
CHATP28329 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.38■□□□□ 0.37
CHATP28329 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CHATP28329 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.38■□□□□ 0.37
CHATP28329 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.38■□□□□ 0.37
CHATP28329 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CHATP28329 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.38■□□□□ 0.37
CHATP28329 POU5F1P4-201ENST00000413175 1085 ntBASIC17.38■□□□□ 0.37
CHATP28329 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.38■□□□□ 0.37
CHATP28329 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 AC005837.3-201ENST00000612163 286 ntBASIC17.38■□□□□ 0.37
CHATP28329 AC008175.2-201ENST00000612840 297 ntBASIC17.38■□□□□ 0.37
CHATP28329 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CHATP28329 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.38■□□□□ 0.37
CHATP28329 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CHATP28329 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CHATP28329 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CHATP28329 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.37■□□□□ 0.37
CHATP28329 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.37■□□□□ 0.37
CHATP28329 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.37■□□□□ 0.37
CHATP28329 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.37■□□□□ 0.37
CHATP28329 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CHATP28329 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.37■□□□□ 0.37
CHATP28329 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CHATP28329 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CHATP28329 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms