Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.05■□□□□ 0.8
VARSP26640 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.05■□□□□ 0.8
VARSP26640 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
VARSP26640 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARSP26640 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARSP26640 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARSP26640 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARSP26640 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
VARSP26640 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.04■□□□□ 0.8
VARSP26640 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.04■□□□□ 0.8
VARSP26640 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
VARSP26640 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VARSP26640 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.04■□□□□ 0.8
VARSP26640 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.04■□□□□ 0.8
VARSP26640 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.04■□□□□ 0.8
VARSP26640 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.04■□□□□ 0.8
VARSP26640 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
VARSP26640 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VARSP26640 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.04■□□□□ 0.8
VARSP26640 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.03■□□□□ 0.8
VARSP26640 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARSP26640 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARSP26640 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARSP26640 PLK5-205ENST00000642079 1969 ntBASIC20.03■□□□□ 0.8
VARSP26640 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARSP26640 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.03■□□□□ 0.8
VARSP26640 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.03■□□□□ 0.8
VARSP26640 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.03■□□□□ 0.8
VARSP26640 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARSP26640 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VARSP26640 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VARSP26640 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
VARSP26640 AC006128.1-201ENST00000624704 1661 ntBASIC20.03■□□□□ 0.8
VARSP26640 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARSP26640 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VARSP26640 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VARSP26640 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VARSP26640 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VARSP26640 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.02■□□□□ 0.8
VARSP26640 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
VARSP26640 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VARSP26640 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VARSP26640 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VARSP26640 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VARSP26640 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
VARSP26640 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VARSP26640 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.02■□□□□ 0.8
VARSP26640 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.02■□□□□ 0.8
VARSP26640 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
VARSP26640 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.02■□□□□ 0.8
VARSP26640 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.02■□□□□ 0.8
VARSP26640 UBE2DNL-204ENST00000602536 740 ntBASIC20.02■□□□□ 0.8
VARSP26640 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VARSP26640 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.02■□□□□ 0.8
VARSP26640 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.02■□□□□ 0.8
VARSP26640 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VARSP26640 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.02■□□□□ 0.8
VARSP26640 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.02■□□□□ 0.8
VARSP26640 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.02■□□□□ 0.8
VARSP26640 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
VARSP26640 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
VARSP26640 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.02■□□□□ 0.79
VARSP26640 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARSP26640 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARSP26640 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.01■□□□□ 0.79
VARSP26640 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARSP26640 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARSP26640 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
VARSP26640 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.01■□□□□ 0.79
VARSP26640 KRT18P20-201ENST00000548986 1279 ntBASIC20.01■□□□□ 0.79
VARSP26640 AC104771.1-201ENST00000603335 964 ntBASIC20.01■□□□□ 0.79
VARSP26640 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VARSP26640 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VARSP26640 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VARSP26640 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VARSP26640 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VARSP26640 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20■□□□□ 0.79
VARSP26640 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
VARSP26640 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
VARSP26640 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20■□□□□ 0.79
VARSP26640 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VARSP26640 AC121338.2-201ENST00000622535 1744 ntBASIC20■□□□□ 0.79
VARSP26640 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20■□□□□ 0.79
VARSP26640 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms