Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
MMP11P24347 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP11P24347 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MMP11P24347 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MMP11P24347 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
MMP11P24347 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.41■□□□□ 0.7
MMP11P24347 FAM201B-201ENST00000458407 597 ntBASIC19.41■□□□□ 0.7
MMP11P24347 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.41■□□□□ 0.7
MMP11P24347 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.41■□□□□ 0.7
MMP11P24347 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.41■□□□□ 0.7
MMP11P24347 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MMP11P24347 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MMP11P24347 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP11P24347 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MMP11P24347 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MMP11P24347 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
MMP11P24347 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MMP11P24347 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP11P24347 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP11P24347 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MMP11P24347 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MMP11P24347 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP11P24347 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MMP11P24347 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP11P24347 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP11P24347 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MMP11P24347 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP11P24347 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MMP11P24347 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
MMP11P24347 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.4■□□□□ 0.7
MMP11P24347 AC091874.3-201ENST00000512672 1195 ntBASIC19.4■□□□□ 0.7
MMP11P24347 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP11P24347 RNA5SP413-201ENST00000516373 109 ntBASIC19.4■□□□□ 0.7
MMP11P24347 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MMP11P24347 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP11P24347 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP11P24347 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MMP11P24347 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP11P24347 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
MMP11P24347 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP11P24347 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MMP11P24347 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.4■□□□□ 0.7
MMP11P24347 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
MMP11P24347 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MMP11P24347 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.39■□□□□ 0.7
MMP11P24347 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.39■□□□□ 0.7
MMP11P24347 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.39■□□□□ 0.7
MMP11P24347 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MMP11P24347 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP11P24347 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP11P24347 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.39■□□□□ 0.69
MMP11P24347 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP11P24347 LSM12P1-201ENST00000411836 588 ntBASIC19.39■□□□□ 0.69
MMP11P24347 DUSP5P2-201ENST00000426873 1033 ntBASIC19.39■□□□□ 0.69
MMP11P24347 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP11P24347 AC083880.1-201ENST00000608266 535 ntBASIC19.39■□□□□ 0.69
MMP11P24347 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP11P24347 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP11P24347 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
MMP11P24347 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.39■□□□□ 0.69
MMP11P24347 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
MMP11P24347 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
MMP11P24347 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
MMP11P24347 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MMP11P24347 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.38■□□□□ 0.69
MMP11P24347 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
MMP11P24347 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.38■□□□□ 0.69
MMP11P24347 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.38■□□□□ 0.69
MMP11P24347 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.38■□□□□ 0.69
MMP11P24347 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.38■□□□□ 0.69
MMP11P24347 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
MMP11P24347 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.38■□□□□ 0.69
MMP11P24347 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MMP11P24347 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.38■□□□□ 0.69
MMP11P24347 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP11P24347 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP11P24347 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP11P24347 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
MMP11P24347 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
MMP11P24347 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.37■□□□□ 0.69
MMP11P24347 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
MMP11P24347 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.37■□□□□ 0.69
MMP11P24347 AC007322.3-201ENST00000426526 701 ntBASIC19.37■□□□□ 0.69
MMP11P24347 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.37■□□□□ 0.69
MMP11P24347 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
MMP11P24347 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MMP11P24347 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms