Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF4P23510 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF4P23510 AC016405.3-201ENST00000607710 860 ntBASIC17.49■□□□□ 0.39
TNFSF4P23510 AC100791.3-201ENST00000617619 330 ntBASIC17.49■□□□□ 0.39
TNFSF4P23510 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.49■□□□□ 0.39
TNFSF4P23510 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.49■□□□□ 0.39
TNFSF4P23510 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.49■□□□□ 0.39
TNFSF4P23510 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF4P23510 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF4P23510 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.49■□□□□ 0.39
TNFSF4P23510 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF4P23510 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TNFSF4P23510 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TNFSF4P23510 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF4P23510 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF4P23510 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF4P23510 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF4P23510 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF4P23510 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFSF4P23510 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF4P23510 AC121338.2-201ENST00000622535 1744 ntBASIC17.48■□□□□ 0.39
TNFSF4P23510 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF4P23510 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.48■□□□□ 0.39
TNFSF4P23510 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.48■□□□□ 0.39
TNFSF4P23510 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF4P23510 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF4P23510 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFSF4P23510 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TNFSF4P23510 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.48■□□□□ 0.39
TNFSF4P23510 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF4P23510 MKRN4P-201ENST00000444706 1521 ntBASIC17.47■□□□□ 0.39
TNFSF4P23510 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TNFSF4P23510 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TNFSF4P23510 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF4P23510 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF4P23510 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TNFSF4P23510 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF4P23510 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFSF4P23510 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TNFSF4P23510 ID1-201ENST00000376105 1233 ntBASIC17.47■□□□□ 0.39
TNFSF4P23510 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFSF4P23510 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.47■□□□□ 0.39
TNFSF4P23510 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.47■□□□□ 0.39
TNFSF4P23510 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFSF4P23510 AL109923.1-201ENST00000618799 583 ntBASIC17.47■□□□□ 0.39
TNFSF4P23510 AL050303.2-201ENST00000619798 666 ntBASIC17.47■□□□□ 0.39
TNFSF4P23510 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.47■□□□□ 0.39
TNFSF4P23510 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TNFSF4P23510 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF4P23510 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF4P23510 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.47■□□□□ 0.39
TNFSF4P23510 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF4P23510 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.47■□□□□ 0.39
TNFSF4P23510 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF4P23510 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF4P23510 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF4P23510 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF4P23510 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TNFSF4P23510 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.47■□□□□ 0.39
TNFSF4P23510 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFSF4P23510 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.46■□□□□ 0.39
TNFSF4P23510 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFSF4P23510 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFSF4P23510 AC026310.3-201ENST00000625186 2373 ntBASIC17.46■□□□□ 0.39
TNFSF4P23510 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TNFSF4P23510 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
TNFSF4P23510 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFSF4P23510 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
TNFSF4P23510 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.46■□□□□ 0.39
TNFSF4P23510 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.46■□□□□ 0.39
TNFSF4P23510 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFSF4P23510 MCRIP2P1-201ENST00000394346 511 ntBASIC17.46■□□□□ 0.39
TNFSF4P23510 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.46■□□□□ 0.39
TNFSF4P23510 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFSF4P23510 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TNFSF4P23510 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFSF4P23510 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.46■□□□□ 0.39
TNFSF4P23510 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.46■□□□□ 0.39
TNFSF4P23510 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFSF4P23510 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFSF4P23510 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFSF4P23510 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFSF4P23510 SLC25A24-204ENST00000569674 2357 ntBASIC17.46■□□□□ 0.39
TNFSF4P23510 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TNFSF4P23510 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.46■□□□□ 0.39
TNFSF4P23510 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.46■□□□□ 0.39
TNFSF4P23510 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TNFSF4P23510 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TNFSF4P23510 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TNFSF4P23510 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.45■□□□□ 0.38
TNFSF4P23510 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFSF4P23510 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.45■□□□□ 0.38
TNFSF4P23510 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFSF4P23510 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFSF4P23510 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFSF4P23510 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFSF4P23510 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TNFSF4P23510 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TNFSF4P23510 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.45■□□□□ 0.38
TNFSF4P23510 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms