Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH3P22223 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.98■□□□□ 0.79
CDH3P22223 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CDH3P22223 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH3P22223 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.98■□□□□ 0.79
CDH3P22223 AC093787.1-201ENST00000450396 207 ntBASIC19.98■□□□□ 0.79
CDH3P22223 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH3P22223 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.98■□□□□ 0.79
CDH3P22223 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH3P22223 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.98■□□□□ 0.79
CDH3P22223 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.98■□□□□ 0.79
CDH3P22223 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH3P22223 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDH3P22223 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH3P22223 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH3P22223 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH3P22223 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH3P22223 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CDH3P22223 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDH3P22223 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDH3P22223 AL512625.2-201ENST00000417533 625 ntBASIC19.97■□□□□ 0.79
CDH3P22223 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.97■□□□□ 0.79
CDH3P22223 RARRES2P4-201ENST00000514074 484 ntBASIC19.97■□□□□ 0.79
CDH3P22223 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.97■□□□□ 0.79
CDH3P22223 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH3P22223 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDH3P22223 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH3P22223 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CDH3P22223 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH3P22223 AC244015.2-201ENST00000616358 1861 ntBASIC19.96■□□□□ 0.79
CDH3P22223 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH3P22223 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH3P22223 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH3P22223 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDH3P22223 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CDH3P22223 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH3P22223 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH3P22223 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDH3P22223 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CDH3P22223 AL138781.1-201ENST00000566567 1274 ntBASIC19.96■□□□□ 0.79
CDH3P22223 AC142086.2-201ENST00000569753 217 ntBASIC19.96■□□□□ 0.79
CDH3P22223 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH3P22223 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH3P22223 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.96■□□□□ 0.79
CDH3P22223 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH3P22223 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.96■□□□□ 0.79
CDH3P22223 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH3P22223 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH3P22223 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH3P22223 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDH3P22223 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH3P22223 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CDH3P22223 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH3P22223 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDH3P22223 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH3P22223 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH3P22223 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH3P22223 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.95■□□□□ 0.78
CDH3P22223 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH3P22223 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.95■□□□□ 0.78
CDH3P22223 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH3P22223 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDH3P22223 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH3P22223 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.95■□□□□ 0.78
CDH3P22223 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH3P22223 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH3P22223 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDH3P22223 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.95■□□□□ 0.78
CDH3P22223 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH3P22223 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CDH3P22223 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH3P22223 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH3P22223 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH3P22223 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.94■□□□□ 0.78
CDH3P22223 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.94■□□□□ 0.78
CDH3P22223 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH3P22223 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH3P22223 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDH3P22223 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH3P22223 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH3P22223 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH3P22223 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.94■□□□□ 0.78
CDH3P22223 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.94■□□□□ 0.78
CDH3P22223 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH3P22223 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH3P22223 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDH3P22223 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms