Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 tV(CAC)HtV(CAC)H 73 nt2.83□□□□□ -1.96
CDC43P18898 YJL020W-AYJL020W-A 258 nt2.83□□□□□ -1.96
CDC43P18898 RPA34YJL148W 702 nt2.83□□□□□ -1.96
CDC43P18898 SHH3YMR118C 591 nt2.83□□□□□ -1.96
CDC43P18898 MF(ALPHA)1YPL187W 498 nt2.83□□□□□ -1.96
CDC43P18898 YBR064WYBR064W 429 nt2.83□□□□□ -1.96
CDC43P18898 IOC3YFR013W 2364 nt2.83□□□□□ -1.96
CDC43P18898 PWP2YCR057C 2772 nt2.83□□□□□ -1.96
CDC43P18898 SNT1YCR033W 3681 nt2.82□□□□□ -1.96
CDC43P18898 YJL016WYJL016W 1686 nt2.82□□□□□ -1.96
CDC43P18898 YDR048CYDR048C 315 nt2.82□□□□□ -1.96
CDC43P18898 YER039C-AYER039C-A 219 nt2.82□□□□□ -1.96
CDC43P18898 YIL058WYIL058W 285 nt2.82□□□□□ -1.96
CDC43P18898 YOL155W-AYOL155W-A 135 nt2.82□□□□□ -1.96
CDC43P18898 TOP1YOL006C 2310 nt2.82□□□□□ -1.96
CDC43P18898 FUS1YCL027W 1539 nt2.82□□□□□ -1.96
CDC43P18898 CCM1YGR150C 2595 nt2.82□□□□□ -1.96
CDC43P18898 YAL064W-BYAL064W-B 381 nt2.81□□□□□ -1.96
CDC43P18898 RPS18BYML026C 441 nt2.81□□□□□ -1.96
CDC43P18898 DBP6YNR038W 1890 nt2.81□□□□□ -1.96
CDC43P18898 SSY1YDR160W 2559 nt2.81□□□□□ -1.96
CDC43P18898 21S_rRNA21S_rRNA 3296 nt2.81□□□□□ -1.96
CDC43P18898 GLC3YEL011W 2115 nt2.8□□□□□ -1.96
CDC43P18898 SAF1YBR280C 1914 nt2.8□□□□□ -1.96
CDC43P18898 ETP1YHL010C 1758 nt2.8□□□□□ -1.96
CDC43P18898 USE1YGL098W 738 nt2.8□□□□□ -1.96
CDC43P18898 PEX11YOL147C 711 nt2.8□□□□□ -1.96
CDC43P18898 YOR302WYOR302W 78 nt2.8□□□□□ -1.96
CDC43P18898 GYL1YMR192W 2163 nt2.8□□□□□ -1.96
CDC43P18898 ATP25YMR098C 1839 nt2.79□□□□□ -1.96
CDC43P18898 LYP1YNL268W 1836 nt2.79□□□□□ -1.96
CDC43P18898 RRP5YMR229C 5190 nt2.79□□□□□ -1.96
CDC43P18898 RNR1YER070W 2667 nt2.79□□□□□ -1.96
CDC43P18898 YCG1YDR325W 3108 nt2.79□□□□□ -1.96
CDC43P18898 YIL102CYIL102C 306 nt2.79□□□□□ -1.96
CDC43P18898 HTB2YBL002W 396 nt2.79□□□□□ -1.96
CDC43P18898 YNL338WYNL338W 159 nt2.79□□□□□ -1.96
CDC43P18898 SMC3YJL074C 3693 nt2.79□□□□□ -1.96
CDC43P18898 RRN6YBL014C 2685 nt2.78□□□□□ -1.96
CDC43P18898 ROD1YOR018W 2514 nt2.78□□□□□ -1.96
CDC43P18898 SSM4YIL030C 3960 nt2.78□□□□□ -1.96
CDC43P18898 MDM20YOL076W 2391 nt2.78□□□□□ -1.96
CDC43P18898 snR79snR79 84 nt2.78□□□□□ -1.96
CDC43P18898 YER121WYER121W 345 nt2.78□□□□□ -1.96
CDC43P18898 CCW14YLR390W-A 717 nt2.78□□□□□ -1.96
CDC43P18898 YPL182CYPL182C 384 nt2.78□□□□□ -1.96
CDC43P18898 RAD4YER162C 2265 nt2.78□□□□□ -1.96
CDC43P18898 DOA4YDR069C 2781 nt2.78□□□□□ -1.96
CDC43P18898 RPN1YHR027C 2982 nt2.78□□□□□ -1.96
CDC43P18898 ARO1YDR127W 4767 nt2.78□□□□□ -1.96
CDC43P18898 AIM9YER080W 1884 nt2.77□□□□□ -1.97
CDC43P18898 VPS64YDR200C 1815 nt2.77□□□□□ -1.97
CDC43P18898 BRO1YPL084W 2535 nt2.77□□□□□ -1.97
CDC43P18898 DPH6YLR143W 2058 nt2.77□□□□□ -1.97
CDC43P18898 YEL025CYEL025C 3567 nt2.77□□□□□ -1.97
CDC43P18898 FAT1YBR041W 2010 nt2.77□□□□□ -1.97
CDC43P18898 YGR174W-AYGR174W-A 87 nt2.77□□□□□ -1.97
CDC43P18898 RPL40AYIL148W 387 nt2.77□□□□□ -1.97
CDC43P18898 YOR008C-AYOR008C-A 225 nt2.77□□□□□ -1.97
CDC43P18898 BIT61YJL058C 1632 nt2.77□□□□□ -1.97
CDC43P18898 CDC45YLR103C 1953 nt2.77□□□□□ -1.97
CDC43P18898 RSF2YJR127C 4143 nt2.77□□□□□ -1.97
CDC43P18898 VBA4YDR119W 2307 nt2.77□□□□□ -1.97
CDC43P18898 CAF130YGR134W 3369 nt2.77□□□□□ -1.97
CDC43P18898 ATG26YLR189C 3597 nt2.76□□□□□ -1.97
CDC43P18898 DLS1YJL065C 504 nt2.76□□□□□ -1.97
CDC43P18898 YMR324CYMR324C 243 nt2.76□□□□□ -1.97
CDC43P18898 ESF2YNR054C 951 nt2.76□□□□□ -1.97
CDC43P18898 YOR170WYOR170W 306 nt2.76□□□□□ -1.97
CDC43P18898 COG8YML071C 1824 nt2.76□□□□□ -1.97
CDC43P18898 DAN4YJR151C 3486 nt2.76□□□□□ -1.97
CDC43P18898 YMR317WYMR317W 3423 nt2.76□□□□□ -1.97
CDC43P18898 GIS4YML006C 2325 nt2.76□□□□□ -1.97
CDC43P18898 FAR1YJL157C 2493 nt2.76□□□□□ -1.97
CDC43P18898 YGR027W-BYGR027W-B 5268 nt2.76□□□□□ -1.97
CDC43P18898 YLR227W-BYLR227W-B 5268 nt2.76□□□□□ -1.97
CDC43P18898 YPR158C-DYPR158C-D 5268 nt2.76□□□□□ -1.97
CDC43P18898 SPC105YGL093W 2754 nt2.75□□□□□ -1.97
CDC43P18898 USA1YML029W 2517 nt2.75□□□□□ -1.97
CDC43P18898 CHS3YBR023C 3498 nt2.75□□□□□ -1.97
CDC43P18898 SHQ1YIL104C 1524 nt2.75□□□□□ -1.97
CDC43P18898 FAP7YDL166C 594 nt2.75□□□□□ -1.97
CDC43P18898 YDR230WYDR230W 348 nt2.75□□□□□ -1.97
CDC43P18898 IGO2YHR132W-A 396 nt2.75□□□□□ -1.97
CDC43P18898 YIL032CYIL032C 357 nt2.75□□□□□ -1.97
CDC43P18898 LSM1YJL124C 519 nt2.75□□□□□ -1.97
CDC43P18898 YJL150WYJL150W 303 nt2.75□□□□□ -1.97
CDC43P18898 YLR364C-AYLR364C-A 123 nt2.75□□□□□ -1.97
CDC43P18898 YMR172C-AYMR172C-A 384 nt2.75□□□□□ -1.97
CDC43P18898 YPL278CYPL278C 303 nt2.75□□□□□ -1.97
CDC43P18898 YPR146CYPR146C 330 nt2.75□□□□□ -1.97
CDC43P18898 YBR137WYBR137W 540 nt2.75□□□□□ -1.97
CDC43P18898 UBP5YER144C 2418 nt2.75□□□□□ -1.97
CDC43P18898 PKH1YDR490C 2301 nt2.75□□□□□ -1.97
CDC43P18898 MNT3YIL014W 1893 nt2.75□□□□□ -1.97
CDC43P18898 ECM5YMR176W 4236 nt2.75□□□□□ -1.97
CDC43P18898 SOK2YMR016C 2358 nt2.74□□□□□ -1.97
CDC43P18898 POL2YNL262W 6669 nt2.74□□□□□ -1.97
CDC43P18898 SKT5YBL061C 2091 nt2.74□□□□□ -1.97
CDC43P18898 TCP1YDR212W 1680 nt2.74□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 62.7 ms