Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC1P18887 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC1P18887 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.37■□□□□ 0.85
XRCC1P18887 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC1P18887 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC1P18887 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.37■□□□□ 0.85
XRCC1P18887 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.37■□□□□ 0.85
XRCC1P18887 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.37■□□□□ 0.85
XRCC1P18887 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.37■□□□□ 0.85
XRCC1P18887 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC1P18887 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC1P18887 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.37■□□□□ 0.85
XRCC1P18887 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC1P18887 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC1P18887 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC1P18887 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
XRCC1P18887 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
XRCC1P18887 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
XRCC1P18887 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
XRCC1P18887 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
XRCC1P18887 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
XRCC1P18887 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
XRCC1P18887 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.36■□□□□ 0.85
XRCC1P18887 AL162412.1-201ENST00000567129 965 ntBASIC20.36■□□□□ 0.85
XRCC1P18887 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.36■□□□□ 0.85
XRCC1P18887 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.36■□□□□ 0.85
XRCC1P18887 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
XRCC1P18887 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
XRCC1P18887 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
XRCC1P18887 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
XRCC1P18887 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.36■□□□□ 0.85
XRCC1P18887 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
XRCC1P18887 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC1P18887 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC1P18887 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.35■□□□□ 0.85
XRCC1P18887 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC1P18887 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC1P18887 TSPY6P-201ENST00000448518 926 ntBASIC20.35■□□□□ 0.85
XRCC1P18887 AF201337.1-201ENST00000520239 748 ntBASIC20.35■□□□□ 0.85
XRCC1P18887 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC1P18887 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.35■□□□□ 0.85
XRCC1P18887 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC1P18887 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
XRCC1P18887 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC1P18887 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.35■□□□□ 0.85
XRCC1P18887 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC1P18887 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.35■□□□□ 0.85
XRCC1P18887 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC1P18887 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.35■□□□□ 0.85
XRCC1P18887 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC1P18887 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.35■□□□□ 0.85
XRCC1P18887 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
XRCC1P18887 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.34■□□□□ 0.85
XRCC1P18887 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.34■□□□□ 0.85
XRCC1P18887 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
XRCC1P18887 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.34■□□□□ 0.85
XRCC1P18887 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.34■□□□□ 0.85
XRCC1P18887 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
XRCC1P18887 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.34■□□□□ 0.85
XRCC1P18887 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.34■□□□□ 0.85
XRCC1P18887 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.34■□□□□ 0.85
XRCC1P18887 AL591742.1-201ENST00000604433 565 ntBASIC20.34■□□□□ 0.85
XRCC1P18887 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.34■□□□□ 0.85
XRCC1P18887 OR10C1-204ENST00000622521 1039 ntBASIC20.34■□□□□ 0.85
XRCC1P18887 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.34■□□□□ 0.85
XRCC1P18887 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
XRCC1P18887 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
XRCC1P18887 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
XRCC1P18887 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
XRCC1P18887 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
XRCC1P18887 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
XRCC1P18887 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.33■□□□□ 0.85
XRCC1P18887 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
XRCC1P18887 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.33■□□□□ 0.85
XRCC1P18887 CYP2T1P-201ENST00000432607 1285 ntBASIC20.33■□□□□ 0.85
XRCC1P18887 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.33■□□□□ 0.85
XRCC1P18887 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.33■□□□□ 0.84
XRCC1P18887 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
XRCC1P18887 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
XRCC1P18887 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
XRCC1P18887 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
XRCC1P18887 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
XRCC1P18887 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XRCC1P18887 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
XRCC1P18887 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
XRCC1P18887 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
XRCC1P18887 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms