Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.32■■□□□ 1
H2AFXP16104 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.32■■□□□ 1
H2AFXP16104 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.32■■□□□ 1
H2AFXP16104 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.32■■□□□ 1
H2AFXP16104 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H2AFXP16104 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
H2AFXP16104 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.32■■□□□ 1
H2AFXP16104 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
H2AFXP16104 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
H2AFXP16104 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.32■■□□□ 1
H2AFXP16104 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H2AFXP16104 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.32■■□□□ 1
H2AFXP16104 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.32■■□□□ 1
H2AFXP16104 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.31■■□□□ 1
H2AFXP16104 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
H2AFXP16104 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.31■■□□□ 1
H2AFXP16104 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.31■■□□□ 1
H2AFXP16104 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.31■■□□□ 1
H2AFXP16104 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
H2AFXP16104 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
H2AFXP16104 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.31■■□□□ 1
H2AFXP16104 U85056.1-201ENST00000616429 682 ntBASIC21.31■■□□□ 1
H2AFXP16104 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.31■■□□□ 1
H2AFXP16104 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
H2AFXP16104 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.31■■□□□ 1
H2AFXP16104 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.31■■□□□ 1
H2AFXP16104 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC21.31■■□□□ 1
H2AFXP16104 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
H2AFXP16104 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H2AFXP16104 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.3■■□□□ 1
H2AFXP16104 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
H2AFXP16104 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H2AFXP16104 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.3■■□□□ 1
H2AFXP16104 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.3■■□□□ 1
H2AFXP16104 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H2AFXP16104 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
H2AFXP16104 AC087239.1-201ENST00000622671 572 ntBASIC21.3■■□□□ 1
H2AFXP16104 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H2AFXP16104 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.3■■□□□ 1
H2AFXP16104 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.3■■□□□ 1
H2AFXP16104 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.3■■□□□ 1
H2AFXP16104 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H2AFXP16104 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.3■■□□□ 1
H2AFXP16104 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.3■■□□□ 1
H2AFXP16104 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.29■■□□□ 1
H2AFXP16104 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC21.29■■□□□ 1
H2AFXP16104 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
H2AFXP16104 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
H2AFXP16104 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
H2AFXP16104 LTB4R2-202ENST00000528054 3092 ntBASIC21.29■■□□□ 1
H2AFXP16104 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2AFXP16104 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
H2AFXP16104 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
H2AFXP16104 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
H2AFXP16104 KRT18P60-201ENST00000312876 1297 ntBASIC21.29■■□□□ 1
H2AFXP16104 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
H2AFXP16104 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.29■■□□□ 1
H2AFXP16104 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.29■■□□□ 1
H2AFXP16104 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.29■■□□□ 1
H2AFXP16104 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2AFXP16104 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2AFXP16104 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
H2AFXP16104 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.29■■□□□ 1
H2AFXP16104 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2AFXP16104 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.28■■□□□ 1
H2AFXP16104 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.28■■□□□ 1
H2AFXP16104 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.28■■□□□ 1
H2AFXP16104 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H2AFXP16104 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H2AFXP16104 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.28■■□□□ 1
H2AFXP16104 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.28■■□□□ 1
H2AFXP16104 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
H2AFXP16104 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.28■■□□□ 1
H2AFXP16104 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
H2AFXP16104 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.28■■□□□ 1
H2AFXP16104 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H2AFXP16104 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H2AFXP16104 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.28■■□□□ 1
H2AFXP16104 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H2AFXP16104 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.28■■□□□ 1
H2AFXP16104 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
H2AFXP16104 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.28■■□□□ 1
H2AFXP16104 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.28■■□□□ 1
H2AFXP16104 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.27■■□□□ 1
H2AFXP16104 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
H2AFXP16104 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.27■■□□□ 1
H2AFXP16104 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.27■■□□□ 1
H2AFXP16104 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
H2AFXP16104 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
H2AFXP16104 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
H2AFXP16104 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.27■■□□□ 1
H2AFXP16104 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.27■■□□□ 1
H2AFXP16104 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.27■■□□□ 1
H2AFXP16104 AC137630.3-201ENST00000607245 391 ntBASIC21.27■■□□□ 1
H2AFXP16104 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.27■■□□□ 1
H2AFXP16104 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.27■■□□□ 1
H2AFXP16104 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.27■■□□□ 1
H2AFXP16104 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
H2AFXP16104 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
H2AFXP16104 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms