Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCF4P15884 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCF4P15884 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
TCF4P15884 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.37■■□□□ 1.01
TCF4P15884 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.37■■□□□ 1.01
TCF4P15884 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.37■■□□□ 1.01
TCF4P15884 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCF4P15884 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
TCF4P15884 AC011767.1-201ENST00000617410 1153 ntBASIC21.37■■□□□ 1.01
TCF4P15884 MIR2861-201ENST00000636310 90 ntBASIC21.37■■□□□ 1.01
TCF4P15884 AL162377.1-201ENST00000618844 1793 ntBASIC21.37■■□□□ 1.01
TCF4P15884 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCF4P15884 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCF4P15884 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCF4P15884 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TCF4P15884 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TCF4P15884 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCF4P15884 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TCF4P15884 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TCF4P15884 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TCF4P15884 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.37■■□□□ 1.01
TCF4P15884 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.37■■□□□ 1.01
TCF4P15884 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
TCF4P15884 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.36■■□□□ 1.01
TCF4P15884 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCF4P15884 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCF4P15884 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.36■■□□□ 1.01
TCF4P15884 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TCF4P15884 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCF4P15884 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
TCF4P15884 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCF4P15884 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCF4P15884 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TCF4P15884 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCF4P15884 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.36■■□□□ 1.01
TCF4P15884 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.36■■□□□ 1.01
TCF4P15884 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.36■■□□□ 1.01
TCF4P15884 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.36■■□□□ 1.01
TCF4P15884 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCF4P15884 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC21.36■■□□□ 1.01
TCF4P15884 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.36■■□□□ 1.01
TCF4P15884 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TCF4P15884 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.36■■□□□ 1.01
TCF4P15884 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TCF4P15884 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.36■■□□□ 1.01
TCF4P15884 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCF4P15884 AC007322.3-201ENST00000426526 701 ntBASIC21.35■■□□□ 1.01
TCF4P15884 TERF1P5-201ENST00000477545 1207 ntBASIC21.35■■□□□ 1.01
TCF4P15884 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.35■■□□□ 1.01
TCF4P15884 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.35■■□□□ 1.01
TCF4P15884 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCF4P15884 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TCF4P15884 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.35■■□□□ 1.01
TCF4P15884 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TCF4P15884 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TCF4P15884 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.35■■□□□ 1.01
TCF4P15884 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TCF4P15884 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TCF4P15884 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCF4P15884 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCF4P15884 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.34■■□□□ 1.01
TCF4P15884 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.34■■□□□ 1.01
TCF4P15884 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TCF4P15884 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.34■■□□□ 1.01
TCF4P15884 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
TCF4P15884 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TCF4P15884 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
TCF4P15884 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TCF4P15884 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
TCF4P15884 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TCF4P15884 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.34■■□□□ 1.01
TCF4P15884 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.34■■□□□ 1.01
TCF4P15884 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCF4P15884 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.34■■□□□ 1.01
TCF4P15884 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TCF4P15884 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TCF4P15884 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
TCF4P15884 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.33■■□□□ 1.01
TCF4P15884 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TCF4P15884 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCF4P15884 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCF4P15884 AC006015.1-201ENST00000429970 570 ntBASIC21.33■■□□□ 1.01
TCF4P15884 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.33■■□□□ 1.01
TCF4P15884 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.33■■□□□ 1.01
TCF4P15884 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.33■■□□□ 1.01
TCF4P15884 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.33■■□□□ 1.01
TCF4P15884 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
TCF4P15884 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.33■■□□□ 1.01
TCF4P15884 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.33■■□□□ 1.01
TCF4P15884 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
TCF4P15884 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TCF4P15884 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TCF4P15884 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
TCF4P15884 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1
TCF4P15884 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.33■■□□□ 1
TCF4P15884 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TCF4P15884 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TCF4P15884 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.32■■□□□ 1
TCF4P15884 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.32■■□□□ 1
TCF4P15884 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms