Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CCL4P13236 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCL4P13236 AC005829.2-201ENST00000571422 1056 ntBASIC19.42■□□□□ 0.7
CCL4P13236 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCL4P13236 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCL4P13236 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL4P13236 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL4P13236 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCL4P13236 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCL4P13236 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CCL4P13236 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.42■□□□□ 0.7
CCL4P13236 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL4P13236 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL4P13236 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL4P13236 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL4P13236 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL4P13236 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL4P13236 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL4P13236 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL4P13236 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL4P13236 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.41■□□□□ 0.7
CCL4P13236 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.41■□□□□ 0.7
CCL4P13236 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.41■□□□□ 0.7
CCL4P13236 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL4P13236 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.41■□□□□ 0.7
CCL4P13236 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.41■□□□□ 0.7
CCL4P13236 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CCL4P13236 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.41■□□□□ 0.7
CCL4P13236 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL4P13236 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CCL4P13236 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCL4P13236 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCL4P13236 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.4■□□□□ 0.7
CCL4P13236 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CCL4P13236 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL4P13236 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCL4P13236 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCL4P13236 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.4■□□□□ 0.7
CCL4P13236 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCL4P13236 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.4■□□□□ 0.7
CCL4P13236 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.4■□□□□ 0.7
CCL4P13236 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.4■□□□□ 0.7
CCL4P13236 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCL4P13236 AC124016.1-201ENST00000609552 612 ntBASIC19.4■□□□□ 0.7
CCL4P13236 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCL4P13236 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.4■□□□□ 0.7
CCL4P13236 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.4■□□□□ 0.7
CCL4P13236 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCL4P13236 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.4■□□□□ 0.7
CCL4P13236 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCL4P13236 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCL4P13236 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCL4P13236 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCL4P13236 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
CCL4P13236 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCL4P13236 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCL4P13236 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.39■□□□□ 0.69
CCL4P13236 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCL4P13236 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CCL4P13236 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.39■□□□□ 0.69
CCL4P13236 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCL4P13236 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CCL4P13236 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.39■□□□□ 0.69
CCL4P13236 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.39■□□□□ 0.69
CCL4P13236 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCL4P13236 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCL4P13236 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCL4P13236 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.39■□□□□ 0.69
CCL4P13236 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL4P13236 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL4P13236 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL4P13236 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCL4P13236 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL4P13236 ECEL1P1-201ENST00000373592 1742 ntBASIC19.38■□□□□ 0.69
CCL4P13236 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL4P13236 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCL4P13236 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.38■□□□□ 0.69
CCL4P13236 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCL4P13236 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.38■□□□□ 0.69
CCL4P13236 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCL4P13236 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.38■□□□□ 0.69
CCL4P13236 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCL4P13236 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCL4P13236 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.38■□□□□ 0.69
CCL4P13236 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.38■□□□□ 0.69
CCL4P13236 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.37■□□□□ 0.69
CCL4P13236 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.37■□□□□ 0.69
CCL4P13236 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.37■□□□□ 0.69
CCL4P13236 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.37■□□□□ 0.69
CCL4P13236 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCL4P13236 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CCL4P13236 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms