Protein–RNA interactions for Protein: P11978

SIR4, Regulatory protein SIR4, yeastyeast

Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIR4P11978 IPT1YDR072C 1584 nt1.79□□□□□ -2.12
SIR4P11978 RMD6YEL072W 696 nt1.79□□□□□ -2.12
SIR4P11978 SUI2YJR007W 915 nt1.79□□□□□ -2.12
SIR4P11978 RPS30AYLR287C-A 192 nt1.79□□□□□ -2.12
SIR4P11978 YMR247W-AYMR247W-A 144 nt1.79□□□□□ -2.12
SIR4P11978 SPR2YOR214C 711 nt1.79□□□□□ -2.12
SIR4P11978 RRP15YPR143W 753 nt1.79□□□□□ -2.12
SIR4P11978 YNL284C-BYNL284C-B 5268 nt1.79□□□□□ -2.12
SIR4P11978 SHE4YOR035C 2370 nt1.79□□□□□ -2.12
SIR4P11978 ATG9YDL149W 2994 nt1.78□□□□□ -2.12
SIR4P11978 CDC37YDR168W 1521 nt1.78□□□□□ -2.12
SIR4P11978 MES1YGR264C 2256 nt1.78□□□□□ -2.12
SIR4P11978 TPK3YKL166C 1197 nt1.78□□□□□ -2.12
SIR4P11978 TRX1YLR043C 312 nt1.78□□□□□ -2.12
SIR4P11978 SEN15YMR059W 387 nt1.78□□□□□ -2.12
SIR4P11978 CIN2YPL241C 807 nt1.78□□□□□ -2.12
SIR4P11978 HSE1YHL002W 1359 nt1.78□□□□□ -2.12
SIR4P11978 UBR2YLR024C 5619 nt1.78□□□□□ -2.12
SIR4P11978 UTP13YLR222C 2454 nt1.78□□□□□ -2.12
SIR4P11978 SPC98YNL126W 2541 nt1.77□□□□□ -2.13
SIR4P11978 PSO2YMR137C 1986 nt1.77□□□□□ -2.13
SIR4P11978 RAV2YDR202C 1056 nt1.77□□□□□ -2.13
SIR4P11978 MIC19YFR011C 513 nt1.77□□□□□ -2.13
SIR4P11978 PCL5YHR071W 690 nt1.77□□□□□ -2.13
SIR4P11978 tT(UGU)HtT(UGU)H 72 nt1.77□□□□□ -2.13
SIR4P11978 SMD3YLR147C 306 nt1.77□□□□□ -2.13
SIR4P11978 YML003WYML003W 873 nt1.77□□□□□ -2.13
SIR4P11978 MIX23YBL107C 591 nt1.77□□□□□ -2.13
SIR4P11978 PKH3YDR466W 2697 nt1.77□□□□□ -2.13
SIR4P11978 FYV8YGR196C 2454 nt1.77□□□□□ -2.13
SIR4P11978 SKI3YPR189W 4299 nt1.76□□□□□ -2.13
SIR4P11978 RRP6YOR001W 2202 nt1.76□□□□□ -2.13
SIR4P11978 SSF1YHR066W 1362 nt1.76□□□□□ -2.13
SIR4P11978 COX6YHR051W 447 nt1.76□□□□□ -2.13
SIR4P11978 YBL068W-AYBL068W-A 237 nt1.76□□□□□ -2.13
SIR4P11978 YBR062CYBR062C 543 nt1.76□□□□□ -2.13
SIR4P11978 UBP3YER151C 2739 nt1.76□□□□□ -2.13
SIR4P11978 NAN1YPL126W 2691 nt1.76□□□□□ -2.13
SIR4P11978 GRR1YJR090C 3456 nt1.76□□□□□ -2.13
SIR4P11978 RAD18YCR066W 1464 nt1.76□□□□□ -2.13
SIR4P11978 YFR056CYFR056C 369 nt1.75□□□□□ -2.13
SIR4P11978 YFR057WYFR057W 456 nt1.75□□□□□ -2.13
SIR4P11978 GEP7YGL057C 864 nt1.75□□□□□ -2.13
SIR4P11978 SMD2YLR275W 333 nt1.75□□□□□ -2.13
SIR4P11978 PKR1YMR123W 369 nt1.75□□□□□ -2.13
SIR4P11978 LST4YKL176C 2487 nt1.74□□□□□ -2.13
SIR4P11978 ATP16YDL004W 483 nt1.74□□□□□ -2.13
SIR4P11978 HTB1YDR224C 396 nt1.74□□□□□ -2.13
SIR4P11978 tH(GUG)E1tH(GUG)E1 72 nt1.74□□□□□ -2.13
SIR4P11978 tH(GUG)E2tH(GUG)E2 72 nt1.74□□□□□ -2.13
SIR4P11978 tH(GUG)G1tH(GUG)G1 72 nt1.74□□□□□ -2.13
SIR4P11978 tH(GUG)G2tH(GUG)G2 72 nt1.74□□□□□ -2.13
SIR4P11978 tH(GUG)HtH(GUG)H 72 nt1.74□□□□□ -2.13
SIR4P11978 tH(GUG)KtH(GUG)K 72 nt1.74□□□□□ -2.13
SIR4P11978 tH(GUG)MtH(GUG)M 72 nt1.74□□□□□ -2.13
SIR4P11978 THG1YGR024C 714 nt1.74□□□□□ -2.13
SIR4P11978 YJL156W-AYJL156W-A 222 nt1.74□□□□□ -2.13
SIR4P11978 SRL4YPL033C 846 nt1.74□□□□□ -2.13
SIR4P11978 PAC1YOR269W 1485 nt1.74□□□□□ -2.13
SIR4P11978 LHS1YKL073W 2646 nt1.74□□□□□ -2.13
SIR4P11978 UBC5YDR059C 447 nt1.73□□□□□ -2.13
SIR4P11978 tQ(UUG)E2tQ(UUG)E2 72 nt1.73□□□□□ -2.13
SIR4P11978 EST3YIL009C-A 546 nt1.73□□□□□ -2.13
SIR4P11978 ATG38YLR211C 681 nt1.73□□□□□ -2.13
SIR4P11978 YLR379WYLR379W 375 nt1.73□□□□□ -2.13
SIR4P11978 ERG29YMR134W 714 nt1.73□□□□□ -2.13
SIR4P11978 YOL085W-AYOL085W-A 213 nt1.73□□□□□ -2.13
SIR4P11978 VID24YBR105C 1089 nt1.73□□□□□ -2.13
SIR4P11978 REV1YOR346W 2958 nt1.73□□□□□ -2.13
SIR4P11978 NSE4YDL105W 1209 nt1.72□□□□□ -2.13
SIR4P11978 RPS26BYER131W 360 nt1.72□□□□□ -2.13
SIR4P11978 VMA7YGR020C 357 nt1.72□□□□□ -2.13
SIR4P11978 RPA34YJL148W 702 nt1.72□□□□□ -2.13
SIR4P11978 YJR023CYJR023C 402 nt1.72□□□□□ -2.13
SIR4P11978 SFM1YOR021C 642 nt1.72□□□□□ -2.13
SIR4P11978 YBR051WYBR051W 351 nt1.72□□□□□ -2.13
SIR4P11978 AME1YBR211C 975 nt1.72□□□□□ -2.13
SIR4P11978 DFG16YOR030W 1860 nt1.72□□□□□ -2.13
SIR4P11978 MSH6YDR097C 3729 nt1.72□□□□□ -2.13
SIR4P11978 ECM25YJL201W 1800 nt1.72□□□□□ -2.13
SIR4P11978 FIG4YNL325C 2640 nt1.72□□□□□ -2.13
SIR4P11978 YGL069CYGL069C 465 nt1.72□□□□□ -2.13
SIR4P11978 YPS5YGL259W 498 nt1.72□□□□□ -2.13
SIR4P11978 PRP38YGR075C 729 nt1.72□□□□□ -2.13
SIR4P11978 SPC2YML055W 537 nt1.72□□□□□ -2.13
SIR4P11978 RPS16AYMR143W 432 nt1.72□□□□□ -2.13
SIR4P11978 GIM3YNL153C 390 nt1.72□□□□□ -2.13
SIR4P11978 YOL106WYOL106W 354 nt1.72□□□□□ -2.13
SIR4P11978 YMR045CYMR045C 5268 nt1.71□□□□□ -2.13
SIR4P11978 SAG1YJR004C 1953 nt1.71□□□□□ -2.14
SIR4P11978 SLM1YIL105C 2061 nt1.71□□□□□ -2.14
SIR4P11978 MON2YNL297C 4911 nt1.71□□□□□ -2.14
SIR4P11978 CWC23YGL128C 852 nt1.71□□□□□ -2.14
SIR4P11978 COX8YLR395C 237 nt1.71□□□□□ -2.14
SIR4P11978 TRL1YJL087C 2484 nt1.71□□□□□ -2.14
SIR4P11978 VPS38YLR360W 1320 nt1.7□□□□□ -2.14
SIR4P11978 SPO75YLL005C 2607 nt1.7□□□□□ -2.14
SIR4P11978 CDC53YDL132W 2448 nt1.7□□□□□ -2.14
SIR4P11978 FMP16YDR070C 282 nt1.7□□□□□ -2.14
SIR4P11978 YGL230CYGL230C 444 nt1.7□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 96.8 ms