Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.46■□□□□ 0.71
CTSBP07858 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.46■□□□□ 0.71
CTSBP07858 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.46■□□□□ 0.71
CTSBP07858 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSBP07858 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSBP07858 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTSBP07858 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTSBP07858 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTSBP07858 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.46■□□□□ 0.71
CTSBP07858 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSBP07858 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSBP07858 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.45■□□□□ 0.7
CTSBP07858 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSBP07858 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSBP07858 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSBP07858 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.45■□□□□ 0.7
CTSBP07858 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSBP07858 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.45■□□□□ 0.7
CTSBP07858 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CTSBP07858 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.45■□□□□ 0.7
CTSBP07858 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSBP07858 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSBP07858 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.45■□□□□ 0.7
CTSBP07858 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSBP07858 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTSBP07858 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTSBP07858 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTSBP07858 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSBP07858 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CTSBP07858 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSBP07858 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CTSBP07858 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSBP07858 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CTSBP07858 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSBP07858 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSBP07858 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSBP07858 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSBP07858 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSBP07858 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSBP07858 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTSBP07858 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSBP07858 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTSBP07858 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CTSBP07858 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.44■□□□□ 0.7
CTSBP07858 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.44■□□□□ 0.7
CTSBP07858 AL356652.1-201ENST00000615962 565 ntBASIC19.44■□□□□ 0.7
CTSBP07858 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSBP07858 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSBP07858 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTSBP07858 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CTSBP07858 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CTSBP07858 AL121603.2-201ENST00000557373 2117 ntBASIC19.43■□□□□ 0.7
CTSBP07858 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSBP07858 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.43■□□□□ 0.7
CTSBP07858 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.43■□□□□ 0.7
CTSBP07858 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSBP07858 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSBP07858 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTSBP07858 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.43■□□□□ 0.7
CTSBP07858 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CTSBP07858 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTSBP07858 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CTSBP07858 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CTSBP07858 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CTSBP07858 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSBP07858 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSBP07858 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSBP07858 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSBP07858 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.42■□□□□ 0.7
CTSBP07858 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.42■□□□□ 0.7
CTSBP07858 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CTSBP07858 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.42■□□□□ 0.7
CTSBP07858 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSBP07858 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSBP07858 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.41■□□□□ 0.7
CTSBP07858 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTSBP07858 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.41■□□□□ 0.7
CTSBP07858 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.41■□□□□ 0.7
CTSBP07858 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSBP07858 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTSBP07858 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.41■□□□□ 0.7
CTSBP07858 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.41■□□□□ 0.7
CTSBP07858 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSBP07858 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSBP07858 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.41■□□□□ 0.7
CTSBP07858 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSBP07858 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.41■□□□□ 0.7
CTSBP07858 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.41■□□□□ 0.7
CTSBP07858 POU5F1P3-201ENST00000428824 1078 ntBASIC19.41■□□□□ 0.7
CTSBP07858 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.41■□□□□ 0.7
CTSBP07858 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTSBP07858 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CTSBP07858 C2orf69P4-201ENST00000565394 541 ntBASIC19.41■□□□□ 0.7
CTSBP07858 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSBP07858 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CTSBP07858 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CTSBP07858 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSBP07858 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSBP07858 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.41■□□□□ 0.7
CTSBP07858 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms