Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 HES2-206ENST00000489730 730 ntTSL 2 BASIC27.26■■□□□ 1.95
COL5A2P05997 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC27.26■■□□□ 1.95
COL5A2P05997 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL5A2P05997 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
COL5A2P05997 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL5A2P05997 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
COL5A2P05997 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC27.26■■□□□ 1.95
COL5A2P05997 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC27.25■■□□□ 1.95
COL5A2P05997 AL390719.1-204ENST00000412397 1219 ntBASIC27.25■■□□□ 1.95
COL5A2P05997 SAPCD2P4-201ENST00000424595 1171 ntBASIC27.25■■□□□ 1.95
COL5A2P05997 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC27.25■■□□□ 1.95
COL5A2P05997 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC27.25■■□□□ 1.95
COL5A2P05997 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
COL5A2P05997 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC27.25■■□□□ 1.95
COL5A2P05997 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
COL5A2P05997 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL5A2P05997 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
COL5A2P05997 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC27.25■■□□□ 1.95
COL5A2P05997 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC27.25■■□□□ 1.95
COL5A2P05997 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL5A2P05997 AF186192.3-201ENST00000583427 947 ntBASIC27.25■■□□□ 1.95
COL5A2P05997 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
COL5A2P05997 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC27.24■■□□□ 1.95
COL5A2P05997 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC27.24■■□□□ 1.95
COL5A2P05997 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL5A2P05997 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC27.24■■□□□ 1.95
COL5A2P05997 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC27.24■■□□□ 1.95
COL5A2P05997 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC27.24■■□□□ 1.95
COL5A2P05997 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
COL5A2P05997 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL5A2P05997 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL5A2P05997 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL5A2P05997 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL5A2P05997 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL5A2P05997 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
COL5A2P05997 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
COL5A2P05997 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC27.23■■□□□ 1.95
COL5A2P05997 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL5A2P05997 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL5A2P05997 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC27.22■■□□□ 1.95
COL5A2P05997 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL5A2P05997 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
COL5A2P05997 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL5A2P05997 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC27.22■■□□□ 1.95
COL5A2P05997 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC27.22■■□□□ 1.95
COL5A2P05997 RPS15-203ENST00000586096 570 ntTSL 2 BASIC27.22■■□□□ 1.95
COL5A2P05997 MIR6786-201ENST00000616843 113 ntBASIC27.22■■□□□ 1.95
COL5A2P05997 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
COL5A2P05997 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
COL5A2P05997 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
COL5A2P05997 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL5A2P05997 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL5A2P05997 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC27.22■■□□□ 1.95
COL5A2P05997 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL5A2P05997 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL5A2P05997 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL5A2P05997 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL5A2P05997 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL5A2P05997 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC27.21■■□□□ 1.95
COL5A2P05997 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL5A2P05997 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL5A2P05997 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL5A2P05997 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL5A2P05997 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL5A2P05997 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL5A2P05997 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
COL5A2P05997 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC27.2■■□□□ 1.95
COL5A2P05997 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC27.2■■□□□ 1.95
COL5A2P05997 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC27.2■■□□□ 1.95
COL5A2P05997 AC145285.6-201ENST00000604632 637 ntBASIC27.2■■□□□ 1.95
COL5A2P05997 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
COL5A2P05997 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
COL5A2P05997 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
COL5A2P05997 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
COL5A2P05997 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC27.2■■□□□ 1.94
COL5A2P05997 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
COL5A2P05997 EXOC3-AS1-202ENST00000623673 1663 ntBASIC27.19■■□□□ 1.94
COL5A2P05997 MMP23A-201ENST00000234610 1017 ntBASIC27.19■■□□□ 1.94
COL5A2P05997 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC27.19■■□□□ 1.94
COL5A2P05997 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC27.19■■□□□ 1.94
COL5A2P05997 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC27.19■■□□□ 1.94
COL5A2P05997 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL5A2P05997 P4HB-223ENST00000576390 439 ntTSL 4 BASIC27.19■■□□□ 1.94
COL5A2P05997 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
COL5A2P05997 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL5A2P05997 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL5A2P05997 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
COL5A2P05997 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL5A2P05997 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL5A2P05997 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
COL5A2P05997 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL5A2P05997 AC092865.7-201ENST00000641832 219 ntBASIC27.19■■□□□ 1.94
COL5A2P05997 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC27.18■■□□□ 1.94
COL5A2P05997 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC27.18■■□□□ 1.94
COL5A2P05997 HTR7P1-201ENST00000538670 1336 ntBASIC27.18■■□□□ 1.94
COL5A2P05997 C1orf229-201ENST00000623686 2258 ntBASIC27.18■■□□□ 1.94
COL5A2P05997 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC27.18■■□□□ 1.94
COL5A2P05997 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL5A2P05997 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
COL5A2P05997 KRT8P9-201ENST00000558927 1449 ntBASIC27.18■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms