Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CLDN5-201ENST00000403084 2357 ntBASIC24.53■■□□□ 1.52
APPP05067 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC24.53■■□□□ 1.52
APPP05067 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.53■■□□□ 1.52
APPP05067 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
APPP05067 CYP21A1P-202ENST00000354927 1481 ntBASIC24.53■■□□□ 1.52
APPP05067 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
APPP05067 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
APPP05067 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.53■■□□□ 1.52
APPP05067 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC24.53■■□□□ 1.52
APPP05067 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC24.53■■□□□ 1.52
APPP05067 CYP2T3P-201ENST00000601990 817 ntBASIC24.53■■□□□ 1.52
APPP05067 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
APPP05067 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
APPP05067 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.53■■□□□ 1.52
APPP05067 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.52■■□□□ 1.52
APPP05067 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
APPP05067 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
APPP05067 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
APPP05067 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
APPP05067 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.52■■□□□ 1.52
APPP05067 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.52■■□□□ 1.52
APPP05067 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
APPP05067 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.52■■□□□ 1.52
APPP05067 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
APPP05067 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.52■■□□□ 1.52
APPP05067 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
APPP05067 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
APPP05067 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC24.52■■□□□ 1.52
APPP05067 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC24.52■■□□□ 1.52
APPP05067 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
APPP05067 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
APPP05067 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC24.51■■□□□ 1.51
APPP05067 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC24.51■■□□□ 1.51
APPP05067 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
APPP05067 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC24.51■■□□□ 1.51
APPP05067 LSM12P1-201ENST00000411836 588 ntBASIC24.51■■□□□ 1.51
APPP05067 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC24.51■■□□□ 1.51
APPP05067 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC24.51■■□□□ 1.51
APPP05067 AC142086.2-201ENST00000569753 217 ntBASIC24.51■■□□□ 1.51
APPP05067 MIR4758-201ENST00000577688 71 ntBASIC24.51■■□□□ 1.51
APPP05067 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC24.51■■□□□ 1.51
APPP05067 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.51■■□□□ 1.51
APPP05067 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
APPP05067 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
APPP05067 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
APPP05067 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
APPP05067 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
APPP05067 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
APPP05067 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.5■■□□□ 1.51
APPP05067 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
APPP05067 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
APPP05067 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC24.5■■□□□ 1.51
APPP05067 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
APPP05067 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
APPP05067 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.5■■□□□ 1.51
APPP05067 KRT18P68-201ENST00000392293 1000 ntBASIC24.5■■□□□ 1.51
APPP05067 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.5■■□□□ 1.51
APPP05067 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC24.5■■□□□ 1.51
APPP05067 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC24.5■■□□□ 1.51
APPP05067 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
APPP05067 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
APPP05067 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC24.5■■□□□ 1.51
APPP05067 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
APPP05067 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
APPP05067 KRT17P1-201ENST00000399211 1546 ntBASIC24.5■■□□□ 1.51
APPP05067 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
APPP05067 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
APPP05067 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.49■■□□□ 1.51
APPP05067 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
APPP05067 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24.49■■□□□ 1.51
APPP05067 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
APPP05067 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
APPP05067 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
APPP05067 AC098934.4-201ENST00000564127 592 ntBASIC24.49■■□□□ 1.51
APPP05067 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
APPP05067 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
APPP05067 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC24.49■■□□□ 1.51
APPP05067 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC24.49■■□□□ 1.51
APPP05067 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC24.49■■□□□ 1.51
APPP05067 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
APPP05067 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
APPP05067 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
APPP05067 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
APPP05067 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
APPP05067 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.48■■□□□ 1.51
APPP05067 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.48■■□□□ 1.51
APPP05067 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.48■■□□□ 1.51
APPP05067 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.48■■□□□ 1.51
APPP05067 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
APPP05067 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.48■■□□□ 1.51
APPP05067 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.48■■□□□ 1.51
APPP05067 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
APPP05067 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
APPP05067 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.47■■□□□ 1.51
APPP05067 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
APPP05067 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
APPP05067 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
APPP05067 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
APPP05067 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
APPP05067 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms