Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.36■□□□□ 0.53
HLA-DPB1P04440 AL512408.1-201ENST00000569378 2000 ntBASIC18.36■□□□□ 0.53
HLA-DPB1P04440 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DPB1P04440 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HLA-DPB1P04440 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 ZNRF2P3-201ENST00000424200 374 ntBASIC18.35■□□□□ 0.53
HLA-DPB1P04440 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HLA-DPB1P04440 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 AC087289.5-201ENST00000586076 3175 ntBASIC18.34■□□□□ 0.53
HLA-DPB1P04440 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 SMG8-203ENST00000578922 2178 ntBASIC18.34■□□□□ 0.53
HLA-DPB1P04440 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HLA-DPB1P04440 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.33■□□□□ 0.53
HLA-DPB1P04440 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DPB1P04440 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HLA-DPB1P04440 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HLA-DPB1P04440 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.53
HLA-DPB1P04440 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPB1P04440 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPB1P04440 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPB1P04440 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
HLA-DPB1P04440 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.33■□□□□ 0.52
HLA-DPB1P04440 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DPB1P04440 MIR6084-201ENST00000622012 110 ntBASIC18.33■□□□□ 0.52
HLA-DPB1P04440 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPB1P04440 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HLA-DPB1P04440 AC099778.1-201ENST00000568593 1911 ntBASIC18.33■□□□□ 0.52
HLA-DPB1P04440 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HLA-DPB1P04440 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DPB1P04440 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.33■□□□□ 0.52
HLA-DPB1P04440 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.33■□□□□ 0.52
HLA-DPB1P04440 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 AC012414.1-201ENST00000556676 535 ntBASIC18.32■□□□□ 0.52
HLA-DPB1P04440 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HLA-DPB1P04440 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 FP700111.2-201ENST00000619190 1892 ntBASIC18.31■□□□□ 0.52
HLA-DPB1P04440 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
HLA-DPB1P04440 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms