Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6AP02538 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6AP02538 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT6AP02538 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
KRT6AP02538 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6AP02538 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6AP02538 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
KRT6AP02538 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6AP02538 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.79■□□□□ 0.76
KRT6AP02538 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT6AP02538 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.79■□□□□ 0.76
KRT6AP02538 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6AP02538 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6AP02538 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6AP02538 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KRT6AP02538 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
KRT6AP02538 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.79■□□□□ 0.76
KRT6AP02538 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6AP02538 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6AP02538 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6AP02538 KRT19P1-201ENST00000405746 1186 ntBASIC19.78■□□□□ 0.76
KRT6AP02538 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
KRT6AP02538 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.78■□□□□ 0.76
KRT6AP02538 SLC7A5P1-201ENST00000568957 537 ntBASIC19.78■□□□□ 0.76
KRT6AP02538 AC243732.1-201ENST00000612648 864 ntBASIC19.78■□□□□ 0.76
KRT6AP02538 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
KRT6AP02538 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6AP02538 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6AP02538 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6AP02538 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KRT6AP02538 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6AP02538 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT6AP02538 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6AP02538 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.77■□□□□ 0.76
KRT6AP02538 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6AP02538 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6AP02538 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6AP02538 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
KRT6AP02538 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6AP02538 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6AP02538 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6AP02538 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6AP02538 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
KRT6AP02538 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.77■□□□□ 0.76
KRT6AP02538 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
KRT6AP02538 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
KRT6AP02538 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KRT6AP02538 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT6AP02538 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.77■□□□□ 0.76
KRT6AP02538 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.77■□□□□ 0.75
KRT6AP02538 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.77■□□□□ 0.75
KRT6AP02538 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
KRT6AP02538 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
KRT6AP02538 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
KRT6AP02538 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT6AP02538 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 AC092720.2-201ENST00000602388 1665 ntBASIC19.76■□□□□ 0.75
KRT6AP02538 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.76■□□□□ 0.75
KRT6AP02538 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT6AP02538 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.76■□□□□ 0.75
KRT6AP02538 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
KRT6AP02538 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.76■□□□□ 0.75
KRT6AP02538 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
KRT6AP02538 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
KRT6AP02538 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KRT6AP02538 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6AP02538 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
KRT6AP02538 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT6AP02538 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
KRT6AP02538 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT6AP02538 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
KRT6AP02538 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.75■□□□□ 0.75
KRT6AP02538 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT6AP02538 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.75■□□□□ 0.75
KRT6AP02538 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6AP02538 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
KRT6AP02538 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6AP02538 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6AP02538 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6AP02538 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
KRT6AP02538 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KRT6AP02538 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms