Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AL356740.2-201ENST00000601559 647 ntBASIC17.69■□□□□ 0.42
HLA-DQB1P01920 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQB1P01920 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQB1P01920 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DQB1P01920 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 MIR3621-201ENST00000580529 85 ntBASIC17.66■□□□□ 0.42
HLA-DQB1P01920 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
HLA-DQB1P01920 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 AC093484.2-201ENST00000580996 2166 ntBASIC17.65■□□□□ 0.42
HLA-DQB1P01920 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 AC092171.4-201ENST00000609130 632 ntBASIC17.65■□□□□ 0.42
HLA-DQB1P01920 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.65■□□□□ 0.42
HLA-DQB1P01920 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms