Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HLA-AP01891 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-AP01891 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-AP01891 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-AP01891 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-AP01891 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-AP01891 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-AP01891 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
HLA-AP01891 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-AP01891 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.23■□□□□ 0.35
HLA-AP01891 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-AP01891 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-AP01891 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-AP01891 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-AP01891 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-AP01891 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-AP01891 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-AP01891 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-AP01891 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-AP01891 TCF3P1-201ENST00000423021 1937 ntBASIC17.23■□□□□ 0.35
HLA-AP01891 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-AP01891 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-AP01891 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
HLA-AP01891 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.22■□□□□ 0.35
HLA-AP01891 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-AP01891 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-AP01891 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HLA-AP01891 AP000974.1-201ENST00000623909 2387 ntBASIC17.22■□□□□ 0.35
HLA-AP01891 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-AP01891 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-AP01891 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
HLA-AP01891 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-AP01891 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-AP01891 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-AP01891 AC131281.2-201ENST00000520478 145 ntBASIC17.22■□□□□ 0.35
HLA-AP01891 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.22■□□□□ 0.35
HLA-AP01891 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-AP01891 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
HLA-AP01891 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-AP01891 AL512631.2-201ENST00000604634 923 ntBASIC17.22■□□□□ 0.35
HLA-AP01891 MIR4466-201ENST00000606121 54 ntBASIC17.22■□□□□ 0.35
HLA-AP01891 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-AP01891 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.22■□□□□ 0.35
HLA-AP01891 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-AP01891 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-AP01891 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-AP01891 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-AP01891 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.21■□□□□ 0.35
HLA-AP01891 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HLA-AP01891 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HLA-AP01891 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.21■□□□□ 0.35
HLA-AP01891 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HLA-AP01891 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
HLA-AP01891 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-AP01891 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
HLA-AP01891 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HLA-AP01891 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-AP01891 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-AP01891 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-AP01891 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-AP01891 OR2I1P-207ENST00000453522 948 ntBASIC17.2■□□□□ 0.34
HLA-AP01891 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.2■□□□□ 0.34
HLA-AP01891 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.2■□□□□ 0.34
HLA-AP01891 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-AP01891 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-AP01891 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-AP01891 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-AP01891 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.2■□□□□ 0.34
HLA-AP01891 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-AP01891 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HLA-AP01891 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-AP01891 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HLA-AP01891 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.2■□□□□ 0.34
HLA-AP01891 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HLA-AP01891 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
HLA-AP01891 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-AP01891 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-AP01891 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-AP01891 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-AP01891 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-AP01891 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HLA-AP01891 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-AP01891 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HLA-AP01891 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms