Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
GGPS1O95749 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
GGPS1O95749 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
GGPS1O95749 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.05■■□□□ 1.28
GGPS1O95749 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
GGPS1O95749 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
GGPS1O95749 AL158047.1-201ENST00000445918 881 ntBASIC23.05■■□□□ 1.28
GGPS1O95749 UNC93B4-201ENST00000505679 747 ntBASIC23.05■■□□□ 1.28
GGPS1O95749 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.05■■□□□ 1.28
GGPS1O95749 AC142381.4-202ENST00000563973 229 ntBASIC23.05■■□□□ 1.28
GGPS1O95749 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC23.05■■□□□ 1.28
GGPS1O95749 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
GGPS1O95749 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
GGPS1O95749 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
GGPS1O95749 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GGPS1O95749 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.04■■□□□ 1.28
GGPS1O95749 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GGPS1O95749 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.04■■□□□ 1.28
GGPS1O95749 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
GGPS1O95749 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GGPS1O95749 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GGPS1O95749 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
GGPS1O95749 C2orf69P4-201ENST00000565394 541 ntBASIC23.04■■□□□ 1.28
GGPS1O95749 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.04■■□□□ 1.28
GGPS1O95749 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
GGPS1O95749 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
GGPS1O95749 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
GGPS1O95749 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
GGPS1O95749 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
GGPS1O95749 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
GGPS1O95749 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
GGPS1O95749 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.03■■□□□ 1.28
GGPS1O95749 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
GGPS1O95749 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
GGPS1O95749 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.03■■□□□ 1.28
GGPS1O95749 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
GGPS1O95749 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
GGPS1O95749 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
GGPS1O95749 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
GGPS1O95749 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
GGPS1O95749 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC23.03■■□□□ 1.28
GGPS1O95749 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.03■■□□□ 1.28
GGPS1O95749 REXO2-208ENST00000539754 791 ntTSL 2 BASIC23.03■■□□□ 1.28
GGPS1O95749 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.03■■□□□ 1.28
GGPS1O95749 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
GGPS1O95749 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.03■■□□□ 1.28
GGPS1O95749 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
GGPS1O95749 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.03■■□□□ 1.28
GGPS1O95749 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
GGPS1O95749 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
GGPS1O95749 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
GGPS1O95749 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
GGPS1O95749 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
GGPS1O95749 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.02■■□□□ 1.28
GGPS1O95749 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
GGPS1O95749 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.02■■□□□ 1.28
GGPS1O95749 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
GGPS1O95749 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.02■■□□□ 1.28
GGPS1O95749 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.02■■□□□ 1.28
GGPS1O95749 PGM5P4-201ENST00000421970 445 ntBASIC23.02■■□□□ 1.28
GGPS1O95749 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.02■■□□□ 1.28
GGPS1O95749 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.02■■□□□ 1.28
GGPS1O95749 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.02■■□□□ 1.28
GGPS1O95749 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.02■■□□□ 1.28
GGPS1O95749 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
GGPS1O95749 SOX15-203ENST00000570788 1093 ntBASIC23.02■■□□□ 1.28
GGPS1O95749 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.02■■□□□ 1.28
GGPS1O95749 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
GGPS1O95749 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.02■■□□□ 1.28
GGPS1O95749 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
GGPS1O95749 Z98882.1-201ENST00000622160 2253 ntBASIC23.02■■□□□ 1.28
GGPS1O95749 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
GGPS1O95749 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
GGPS1O95749 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
GGPS1O95749 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.01■■□□□ 1.27
GGPS1O95749 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
GGPS1O95749 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
GGPS1O95749 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
GGPS1O95749 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
GGPS1O95749 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
GGPS1O95749 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
GGPS1O95749 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
GGPS1O95749 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
GGPS1O95749 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
GGPS1O95749 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
GGPS1O95749 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
GGPS1O95749 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
GGPS1O95749 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
GGPS1O95749 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23■■□□□ 1.27
GGPS1O95749 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC23■■□□□ 1.27
GGPS1O95749 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
GGPS1O95749 AL356652.1-201ENST00000615962 565 ntBASIC23■■□□□ 1.27
GGPS1O95749 AC007375.3-201ENST00000600936 2314 ntBASIC23■■□□□ 1.27
GGPS1O95749 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
GGPS1O95749 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC23■■□□□ 1.27
GGPS1O95749 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23■■□□□ 1.27
GGPS1O95749 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
GGPS1O95749 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
GGPS1O95749 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
GGPS1O95749 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms