Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CDRT1O95170 AC138932.1-201ENST00000534164 6830 ntBASIC18.2■□□□□ 0.5
CDRT1O95170 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CDRT1O95170 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.2■□□□□ 0.5
CDRT1O95170 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.2■□□□□ 0.5
CDRT1O95170 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.2■□□□□ 0.5
CDRT1O95170 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.2■□□□□ 0.5
CDRT1O95170 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDRT1O95170 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 AL356441.2-201ENST00000443009 864 ntBASIC18.2■□□□□ 0.5
CDRT1O95170 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.2■□□□□ 0.5
CDRT1O95170 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.2■□□□□ 0.5
CDRT1O95170 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.2■□□□□ 0.5
CDRT1O95170 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.2■□□□□ 0.5
CDRT1O95170 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDRT1O95170 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.19■□□□□ 0.5
CDRT1O95170 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CDRT1O95170 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.19■□□□□ 0.5
CDRT1O95170 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.19■□□□□ 0.5
CDRT1O95170 MIR4466-201ENST00000606121 54 ntBASIC18.19■□□□□ 0.5
CDRT1O95170 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.19■□□□□ 0.5
CDRT1O95170 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CDRT1O95170 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
CDRT1O95170 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDRT1O95170 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 AC004408.2-201ENST00000623613 2777 ntBASIC18.19■□□□□ 0.5
CDRT1O95170 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDRT1O95170 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDRT1O95170 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDRT1O95170 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.18■□□□□ 0.5
CDRT1O95170 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDRT1O95170 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.18■□□□□ 0.5
CDRT1O95170 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.18■□□□□ 0.5
CDRT1O95170 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.18■□□□□ 0.5
CDRT1O95170 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDRT1O95170 AL158211.5-201ENST00000623583 2518 ntBASIC18.18■□□□□ 0.5
CDRT1O95170 TNXA-203ENST00000507684 2038 ntBASIC18.18■□□□□ 0.5
CDRT1O95170 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDRT1O95170 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDRT1O95170 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.18■□□□□ 0.5
CDRT1O95170 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDRT1O95170 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDRT1O95170 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDRT1O95170 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.17■□□□□ 0.5
CDRT1O95170 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CDRT1O95170 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDRT1O95170 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDRT1O95170 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDRT1O95170 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDRT1O95170 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDRT1O95170 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
CDRT1O95170 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDRT1O95170 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDRT1O95170 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDRT1O95170 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDRT1O95170 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDRT1O95170 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDRT1O95170 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.17■□□□□ 0.5
CDRT1O95170 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDRT1O95170 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.17■□□□□ 0.5
CDRT1O95170 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDRT1O95170 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDRT1O95170 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDRT1O95170 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDRT1O95170 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDRT1O95170 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDRT1O95170 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDRT1O95170 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CDRT1O95170 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDRT1O95170 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDRT1O95170 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDRT1O95170 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDRT1O95170 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDRT1O95170 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDRT1O95170 SLC47A1P1-202ENST00000449666 945 ntBASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms